Transcript Information: R_Transcript_23588.p1


Annotated TAIR IDAT5G54750.2
Annotated Gene NameTransport protein particle (TRAPP) component
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22242080-22243477 | Forward length=199
E-Value3.6E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 190.497873641043
Replicate 282.220806672226
Replicate 390.47198882514
Condition 2: 8 Hour
Replicate 156.37921844996
Replicate 268.773804654403
Replicate 378.860358745715
Condition 3: 24 Hour
Replicate 194.146301908568
Replicate 281.734194712139
Replicate 389.757982245428


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23588.p1 GENE.R_Transcript_23588~~R_Transcript_23588.p1 ORF type:3prime_partial len:119 (+),score=22.82,TRAPP|PF04051.12|2.7e-23 R_Transcript_23588:137-490(+)
ATGCCTGCAGTAGCTCCACGATCTGGGGACGCCATCTTCGCCGGTGCTGAACGTGTTAATGCGGAGTTGTTCACTTTAACATATGGAGCCATAGTTCGTCAACTCCTTACGGATCTCGAAGAGGTCGATGAAGTCAACAAGCAGCTCGATCAAATGGGCTACAATATTGGTGTGCGTCTAATTGATGAATTTCTTGCGAAGTCTAATGTCTCCAGATGTGTGGACTTCAAGGAGACCGCTGATGTCATTGCTAAGGTTGGCTTCAAAATGTTTTTGGGGGTAACTGCAACTGTGACCAACTGGGATGCCGAGGGAACAACTTGCAGTCTTGTGTTGGAGGATAATCCATTGGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23588.p1 GENE.R_Transcript_23588~~R_Transcript_23588.p1 ORF type:3prime_partial len:119 (+),score=22.82,TRAPP|PF04051.12|2.7e-23 R_Transcript_23588:137-490(+)
MPAVAPRSGDAIFAGAERVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGVRLIDEFLAKSNVSRCVDFKETADVIAKVGFKMFLGVTATVTNWDAEGTTCSLVLEDNPLV

Click here to download the sequence:
Link to NCBI Protein BLAST