Transcript Information: R_Transcript_23594.p1


Annotated TAIR IDAT3G26100.2
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9538063-9540149 | Forward length=532
E-Value1.7E-255
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 144.080279856634
Replicate 235.374719295486
Replicate 345.50181889848
Condition 2: 8 Hour
Replicate 135.812659616719
Replicate 245.583747789628
Replicate 344.864525116149
Condition 3: 24 Hour
Replicate 146.227965574152
Replicate 234.858311670595
Replicate 342.187185904451


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23594.p1 GENE.R_Transcript_23594~~R_Transcript_23594.p1 ORF type:complete len:441 (+),score=69.51,RCC1|PF00415.14|6.7e+03,RCC1|PF00415.14|4e-10,RCC1|PF00415.14|0.0036,RCC1|PF00415.14|1.5,RCC1|PF00415.14|4e-05,RCC1|PF00415.14|9.9e-14,RCC1|PF00415.14|3.4e-06,RCC1|PF00415.14|0.001,RCC1_2|PF13540.2|1.2e-07,RCC1_2|PF13540.2|0.0053,RCC1_2|PF13540.2|0.023,RCC1_2|PF13540.2|1.5,RCC1_2|PF13540.2|0.047,RCC1_2|PF13540.2|3.5e-05,RCC1_2|PF13540.2|0.0046 R_Transcript_23594:2076-3398(+)
ATGTGCCAAAAGAGGGTTATATTTAAACCAATGACCCCTGAAGAAAGGGAGGATTTGAAGCAAAAATGTGGAGGGTCTTGGAAATTAGTGCTTAGGTATTTGTTGGCTGGAGAAGCCTGTTGTAGGAGAGAAAAATCGCAGGCAATTGCTGGGCCCGGTCACAGCATTGCTGTGACCTCGAATGGAGCTGTTTATTCATTCGGTTCTAATAGCTCGGGACAGCTTGGTCATGGCCTGATGCCTGATGGTACCACAGCTGATGAGTGTCGGCCTCGCTTGATAAGATCCCTGCAAGGAATTCGGATCATACAAGCTGCTGCTGGGGCTGGCAGGACAATGCTGATTAGTGATGCTGGGAAGGTTTATGCTTTCGGGAAAGACACGTTCGGGGATTCTGAGCCTGTTGCTCAAGGTCCCCGAACAGTGAACACCCCACGGCTTGTCGAGTCCTTGAAGGACATATTTGTTGTGCAAGCTGCTATTGGGAATTTCTTCACTGCTGTGTTGTCAAGAGAAGGAAGAATTTATACGTTTTCTTGGGGCAGTGACGATAGGCGAGGGCACCATACGGATCCAAATGATGTACAACCGCGCCCTTTGTTGGGAGCGCTTGAGAATATTCCGGTTGTGCAGATTGCTGCTGGATATTGCTACCTTCTCGCCCTCACTTGTCAACCTAGTGGCATGTCGGTGTATTCTGTGGGGTGTGGATTGGGAGGAAAGCTCGGCCATGGCTCAAGAACAGGTGAAAAATACCCACGATTGATCGAACAATTCCAAAAATTGAACCTTCAGCCTATGGTTGTTGCAGCTGGTGCTTGGCACGCAGCTGTTGTCGGCTATGATGGAAGAGTATGCACGTGGGGTTGGGGCCGTTATGGATGTTTAGGACATGGGAATGAAGATTGTGAGTCCGTTCCAAGGGTGGTGGATGCCTTGAGCGATGTCAAGGCAGTCCATGTTGCCACAGGCGATTACACCACGTTTGTGTTATCTGACAATGGCGATGTATATTCATTCGGTTGTGGTGAATCCTCTAGCCTCGGGCACAATAGCGCTGGGGCTGACGGCCAGCAGGGGCAAAGGCATGCGAATGTACTAAAGCCAGAGCTAGTAAAATCACTAAAGCAAGTGAATGAGCGGGTGGTGCAAATCAGCTTGACCAATTCCATATTCTGGAACGCTCACACCTTCGCTCTCACTGAACCAGGAAAGCTCTACTCATTCGGGGCGGGTGACAAAGGGCAGCTGGGTGTAAAGCTTGGTGAGAACCAGCTCGAAAGGGGCAATCCGGAGCTGGTCGAAATTGACCTTAGTAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23594.p1 GENE.R_Transcript_23594~~R_Transcript_23594.p1 ORF type:complete len:441 (+),score=69.51,RCC1|PF00415.14|6.7e+03,RCC1|PF00415.14|4e-10,RCC1|PF00415.14|0.0036,RCC1|PF00415.14|1.5,RCC1|PF00415.14|4e-05,RCC1|PF00415.14|9.9e-14,RCC1|PF00415.14|3.4e-06,RCC1|PF00415.14|0.001,RCC1_2|PF13540.2|1.2e-07,RCC1_2|PF13540.2|0.0053,RCC1_2|PF13540.2|0.023,RCC1_2|PF13540.2|1.5,RCC1_2|PF13540.2|0.047,RCC1_2|PF13540.2|3.5e-05,RCC1_2|PF13540.2|0.0046 R_Transcript_23594:2076-3398(+)
MCQKRVIFKPMTPEEREDLKQKCGGSWKLVLRYLLAGEACCRREKSQAIAGPGHSIAVTSNGAVYSFGSNSSGQLGHGLMPDGTTADECRPRLIRSLQGIRIIQAAAGAGRTMLISDAGKVYAFGKDTFGDSEPVAQGPRTVNTPRLVESLKDIFVVQAAIGNFFTAVLSREGRIYTFSWGSDDRRGHHTDPNDVQPRPLLGALENIPVVQIAAGYCYLLALTCQPSGMSVYSVGCGLGGKLGHGSRTGEKYPRLIEQFQKLNLQPMVVAAGAWHAAVVGYDGRVCTWGWGRYGCLGHGNEDCESVPRVVDALSDVKAVHVATGDYTTFVLSDNGDVYSFGCGESSSLGHNSAGADGQQGQRHANVLKPELVKSLKQVNERVVQISLTNSIFWNAHTFALTEPGKLYSFGAGDKGQLGVKLGENQLERGNPELVEIDLSS*

Click here to download the sequence:
Link to NCBI Protein BLAST