Annotated TAIR ID | AT5G15170.1 |
Annotated Gene Name | tyrosyl-DNA phosphodiesterase-related |
Annotated Gene Symbol(s) | TDP1 |
Annotation Type | Ortholog |
Chromosome Position | chr5:4926300-4929307 | Reverse length=605 |
E-Value | 9.4E-228 |
Replicate 1 | 5.7443141828085 |
Replicate 2 | 3.4582141862138 |
Replicate 3 | 4.2781701098696 |
Replicate 1 | 5.4012937383629 |
Replicate 2 | 6.0177079072602 |
Replicate 3 | 7.9546764189343 |
Replicate 1 | 7.1911954992661 |
Replicate 2 | 5.0597358631324 |
Replicate 3 | 6.6306870080895 |
>R_Transcript_23609.p1 GENE.R_Transcript_23609~~R_Transcript_23609.p1 ORF type:5prime_partial len:680 (+),score=123.43,Tyr-DNA_phospho|PF06087.8|2.8e-91 R_Transcript_23609:2-2041(+)
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCAACCTTCACCGGAATCTCCATCTCAAACCTCATCATCACTTTCTCTATCCTCCACTTAGGGTTTCACTACGCTCGCATGCAACTCGACCTTCATCAATGTCTCTCTCTCAGGTCGGAGTGCTGATACCGTTGAATAAAAGCTTGAAGGAGGATAAGTCATTGCCAGAACTCAAAGTACTGGAAGGCGATAATGTGATAGGGCGTAATAATGTTCCGGTGACAGATAAAAGACTCAGTCGAAAGCATATTACCTTGTCTGCTTCTACTGACGGTTCTGCCGATTTGCTCGTCGAAGGGATGAATCCTGTGGTGATTAAATCGGGAGGTCAAAGGAGGATATTGAGTTCCGGTGAGAGGGCTACTGTTAATAGTGGCAATCTTATTGAGTTAATACCAGGAAGTTACTTTTTTAAGTATGTAACTTTATGTGGTCGAAATTCCGCTATGGTTGGCAAAGTGTGTGGCAGTGATAGTGAATGTAAAAGTGCTGGAAGTGGCACAAAACGAACAAGAGAAGAGTCTACCTCTGGAGCTTCTGCTGGAAAGTCACTGATTCAACATAGAAGTGAGACAAAAGTAAATGAAGAATCTTCTGTGAGCAGAAATAATGTAAATGCTGAATCTAAAAGACAAAATGTTTCAGCTTCGGGCAAGAGTGAGGAGGCACTTCGTCACTTTCACATTTCTGATGATAAATTACCTTCAAGTTTTCGTCTTATGAAAGTCCGAGGGCTTCCAGAATGGGCAAATACCTCTTGTGTTTCCATTGACGAGGTTATCAAGGGGGATGTGCTTGTTGCTATCCTTTCAAATTACATGGTGGACCTAGATTGGTTATTATCTGCATGTCCAAAACTTAAGCAAGTTCCTCATGTGCTGGTTGTTCATGGAGAAAGTGATGGTACCCTTGAGTATATGAAGAGAAACAAGCCTAGCAACTGGATTTTGCATAAGCCACCATTACCTATTTCATATGGGACGCATCATTCAAAGGCTATGCTTCTTGTGTACCCTCGGGGAGTGAGGGTCATTGTTCACACAGCAAATTTGATATATGTTGACTGGAATAATAAAAGTCAAGGATTGTGGATGCAAGATTTTCCTTGGAAAGACCAGAAAGAGGGAAGCAAAGGATGTGAATTTGAAACTGACCTTGTTGATTACCTACAGGCTCTAAAGGTCAGATTGATTGCATCAGTTCCTGGATATCATTCAGGGTCGAATTTAAAGAAATGGGGTCATATGAAACTACGTTCCATTCTGGAGCGGTGTACTTTTGACAAAGAATTTAAGAAATCGCCTCTTGCTTATCAGTTTTCATCTCTCGGTTCTCTGGATGAGAAGTGGATGGCTGAACTAAGATCTTCAATGTCATCTGGCTTGTTGGCTGATAAGACGCCCTTGGGTTTAGGAGAGCCACTAATAATATGGCCTACAGTGGAAGATGTCAGATGGTCATTGGAGGGATATGCAGCTGGAAATGCCATCCCTAGTCCGGTAAAAAATGTCAAGAAGGAATTTTTGAAGAAGTACTGGGCAAAGTGGAAGGCCACCCACACTGGCCGATGCCGTGCAATGCCTCATATAAAGACATTTGTTCGTTATAATGGTCAAAATCTTGCTTGGTTCTTGCTTACATCAGCAAATCTCAGCAAAGCTGCCTGGGGAGCCCTTCAAAAGAACAATTCACAGTTGATGATTCGTTCCTATGAGCTGGGTGTGCTGTTTTTGCCTACTGCTTTCAGAAACATTTGTGGATTCTCTTGTACAGATGATAAGTGTTCTATAAAGGTTAAGAGGGGATCAGTGGATAATTCCAATCGAGAGGCAAAATTGGTAACCCTGAGATGGTCTGGAATAGAGAATGCAGATTCTGATTCTGAAATATTTCCACTTCCTGTTCCATATGAACTTCCGCCACAATTGTACTCTCCTCAAGATGTTCCATGGTCTTGGGACTGCGAATACAGGCAAAAGGACGTTTATGGTCAATTTTGGCCCTGA
Click here to download the sequence:
Link to NCBI Nucleotide BLAST
>R_Transcript_23609.p1 GENE.R_Transcript_23609~~R_Transcript_23609.p1 ORF type:5prime_partial len:680 (+),score=123.43,Tyr-DNA_phospho|PF06087.8|2.8e-91 R_Transcript_23609:2-2041(+)
LSLSLSLSLSLFNLHRNLHLKPHHHFLYPPLRVSLRSHATRPSSMSLSQVGVLIPLNKSLKEDKSLPELKVLEGDNVIGRNNVPVTDKRLSRKHITLSASTDGSADLLVEGMNPVVIKSGGQRRILSSGERATVNSGNLIELIPGSYFFKYVTLCGRNSAMVGKVCGSDSECKSAGSGTKRTREESTSGASAGKSLIQHRSETKVNEESSVSRNNVNAESKRQNVSASGKSEEALRHFHISDDKLPSSFRLMKVRGLPEWANTSCVSIDEVIKGDVLVAILSNYMVDLDWLLSACPKLKQVPHVLVVHGESDGTLEYMKRNKPSNWILHKPPLPISYGTHHSKAMLLVYPRGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKDQKEGSKGCEFETDLVDYLQALKVRLIASVPGYHSGSNLKKWGHMKLRSILERCTFDKEFKKSPLAYQFSSLGSLDEKWMAELRSSMSSGLLADKTPLGLGEPLIIWPTVEDVRWSLEGYAAGNAIPSPVKNVKKEFLKKYWAKWKATHTGRCRAMPHIKTFVRYNGQNLAWFLLTSANLSKAAWGALQKNNSQLMIRSYELGVLFLPTAFRNICGFSCTDDKCSIKVKRGSVDNSNREAKLVTLRWSGIENADSDSEIFPLPVPYELPPQLYSPQDVPWSWDCEYRQKDVYGQFWP*
Click here to download the sequence:
Link to NCBI Protein BLAST