Transcript Information: R_Transcript_236197.p1


Annotated TAIR IDAT2G41840.1
Annotated Gene NameRibosomal protein S5 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17460016-17461398 | Reverse length=285
E-Value6.6E-141
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.064270989277179
Replicate 20.073930635268655
Replicate 30
Condition 2: 8 Hour
Replicate 10.25865350296386
Replicate 20.15747099888159
Replicate 30
Condition 3: 24 Hour
Replicate 10.16167469878665
Replicate 20
Replicate 30.15413876540068


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_236197.p1 GENE.R_Transcript_236197~~R_Transcript_236197.p1 ORF type:3prime_partial len:284 (+),score=69.25,Ribosomal_S5|PF00333.16|1.6e-30,Ribosomal_S5_C|PF03719.11|7.7e-28 R_Transcript_236197:31-879(+)
ATGGCTGATACTGCTGGCGTAGCCGATCAACAACAACAAAGAGGAGAAAGATCCGAGAGAGGATTTGGCCGTGGACGTGGTCGTGGTGGCCGTGGCGGTCGTGGAGGTCGCGGTGGTGCCCGTGGCGGTAGACGTGGTGGAAAGGAAGAATCAGCTGGTGGCTGGGTTCCTGTTACCAAGTTGGGTAGATTAGTCTCTGAAAAGCTCATCAAGAAATTAGAAGAAATCTACTTGTTCTCTCTCCCAATCAAGGAATACCAAATAATTGATTGGTTCTTGGGATCTAAACTCAAGGATGAAGTTATGAAGATTATGCCTGTTCAAAAGCAAACAAGAGCTGGTCAAAGAACTAGATTCAAGGCTTTTGTCGTAATTGGTGACAGAGATGGTCACATTGGTCTCGGTGTCAAATGTGCTAAGGAAGTTGCTACTGCTATCCGTGGTGCTATCATCGATGCTAAGCTCGGTATTGTCCCTGTTAGAAGAGGTTACTGGGGTAACAAAATCGGTGCTCCTCACACTGTCCCACAAAAGACCACAGGTAAATGTGGATCTGTCAGAGTAAGACTTGTTCCTGCTCCACGTGGTACTGGTATCGTTGCTGCCAGAACACCAAAGAAGGTCTTACAATATGCTGGTATTGAAGACGTCTTCACTCAATCCACTGGATCTACCAAGACCCTTGGTAACTTCGTCAAGGCCACTTTTGATGCCCTCGCCAAGACTTATGGTTATTTGACTCCTGACTTGTGGAGAGAAACCAGATTACAAAAGGCTCCATATCAAGAGTTCACTGACTTCTTATACCAAACCGGAAAGGAAAAGGTTGAAAAGAAGAAGGCTGCCGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_236197.p1 GENE.R_Transcript_236197~~R_Transcript_236197.p1 ORF type:3prime_partial len:284 (+),score=69.25,Ribosomal_S5|PF00333.16|1.6e-30,Ribosomal_S5_C|PF03719.11|7.7e-28 R_Transcript_236197:31-879(+)
MADTAGVADQQQQRGERSERGFGRGRGRGGRGGRGGRGGARGGRRGGKEESAGGWVPVTKLGRLVSEKLIKKLEEIYLFSLPIKEYQIIDWFLGSKLKDEVMKIMPVQKQTRAGQRTRFKAFVVIGDRDGHIGLGVKCAKEVATAIRGAIIDAKLGIVPVRRGYWGNKIGAPHTVPQKTTGKCGSVRVRLVPAPRGTGIVAARTPKKVLQYAGIEDVFTQSTGSTKTLGNFVKATFDALAKTYGYLTPDLWRETRLQKAPYQEFTDFLYQTGKEKVEKKKAAE

Click here to download the sequence:
Link to NCBI Protein BLAST