Transcript Information: R_Transcript_236361.p1


Annotated TAIR IDAT5G07120.1
Annotated Gene Namesorting nexin 2B
Annotated Gene Symbol(s)SNX2b
Annotation TypeOrtholog
Chromosome Positionchr5:2207065-2209355 | Reverse length=572
E-Value9.5E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7428953661868
Replicate 21.98390240154
Replicate 33.7877282639307
Condition 2: 8 Hour
Replicate 16.3624688445598
Replicate 26.8667274945373
Replicate 36.2887469865908
Condition 3: 24 Hour
Replicate 14.8807936625828
Replicate 24.8625767632769
Replicate 33.1021943650721


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_236361.p1 GENE.R_Transcript_236361~~R_Transcript_236361.p1 ORF type:5prime_partial len:127 (-),score=37.73,Vps5|PF09325.6|5.5e-08 R_Transcript_236361:71-451(-)
TTGTTGAGGTTGTTTAAGGAGCTTAGACAGGCTGTTGCTAATGACTGGGGCGGGGCGAAACCATCTGTTGTTGAAGAGGATAAGGAGTTCTTGGAGAAGAAGGAGAGGCTTACTGAGCTTGAACAGCAACTTAGCAATGTGTCTGAACAGGCGGAAATTCTAGTGAAAGCACAGCAAGATATTGGAGAAACAATGGGGGAGCTAGGGTTGGCGTTTGTTAAGTTGACAAAGTTTGAGATTGAAGAAGCCATTTATGAGTGCCAACGAGCAAGTGCGGGTGATATGAAGAATGTGGCAACAGCTTCAGTTAAAGCGAGCAGACTTTATCGCGAATTGAATGCACAGACTGTGAAGCATTTGGTAAGTGTTGTATTTATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_236361.p1 GENE.R_Transcript_236361~~R_Transcript_236361.p1 ORF type:5prime_partial len:127 (-),score=37.73,Vps5|PF09325.6|5.5e-08 R_Transcript_236361:71-451(-)
LLRLFKELRQAVANDWGGAKPSVVEEDKEFLEKKERLTELEQQLSNVSEQAEILVKAQQDIGETMGELGLAFVKLTKFEIEEAIYECQRASAGDMKNVATASVKASRLYRELNAQTVKHLVSVVFI*

Click here to download the sequence:
Link to NCBI Protein BLAST