Transcript Information: R_Transcript_23650.p1


Annotated TAIR IDAT5G37930.1
Annotated Gene NameProtein with RING/U-box and TRAF-like domains
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15102239-15103651 | Reverse length=349
E-Value6.2E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.156889563513
Replicate 26.2085834564322
Replicate 38.1897744631405
Condition 2: 8 Hour
Replicate 17.5037328064138
Replicate 210.218682561832
Replicate 313.760091921906
Condition 3: 24 Hour
Replicate 18.7634640492849
Replicate 25.6916797136974
Replicate 37.884280720549


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23650.p1 GENE.R_Transcript_23650~~R_Transcript_23650.p1 ORF type:complete len:372 (+),score=42.81,Sina|PF03145.12|6.3e-15 R_Transcript_23650:98-1117(+)
ATGGCGAAATTCTCAATATTGAGAGATGAGGAAGAAGACGAAGCAGACGAGGAATTTTGCATACGTAGCCCTAAAAGGAGAAGAACCTCTCACTCTCAGCCCCTTCCCATTGCCAGTGCCCCACCTAATTATGAAGACCATCAACAACAGCAACAACAGCAACAACAACAACGTTCGGCAGAAGGTGATGATGATAATGATACCAGATTTTTCGAGGGACCCACCAATTCAGGCTCCATGTCCGTCATTTTGTCCGACCCGGATGTTTTGGACTGTTCTATTTGCTTTAATCCTTTGACCTCTCCTGTCTTTCAGTGTGACAATGGGCATATTGCGTGTTCTTCTTGTTGCACTAAGCTTGGTAACAAATGTCCTTCATGTTGTGGGAAGATTGGCTATAATCGATGCCGGGCTATTGAGAAGGTTATCGAATCTGTAAGAGTACCTTGCTGTTACTTGAGGTATGGCTGTAGAGAAACCGTTAGTTACTGTAAGAAAGATGAGCATGAGGAGATCTGCATCTATGCCCCTTGTTCATGTCCCTTTCCTGACTGCATCTTCCGTGGTTCGTCTAGAAACCTTTCTCAGCATGTGCGCATTGAACATGCAGATTTTGTGATTCGCTTCTGTTACGACTCCATCTTTCCTGTTTCTGTAAGGATGGATGAAAAATTTATTGTTCTTCAAGAAGAGAGAGATGGGACTCTGTTTATCCTGAGCCATGGGAACACAGTGACAGCTAGGTGTATTGACCCGAGCCTGTCAAAGGGAAGGTTTGGATATGATATTGTACTCTGTAAAGGAGGTAGCTCTCTAAGATTTAGATCTTCCACTCATTGTAGTACAGGACAGGTCAGGGATTCTCCTTCTGTTGACTATTTTCTAGTTCCTGGTTACTTCTACCACACTGGAGGCCACCTCAAATTGGATATTTGCATATGGAGTATGCATCTATCTCCTAAAGACACCACTCGAGCAGTTAATGATTTACAAACGGCTGACAATCAGTGGAGATCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23650.p1 GENE.R_Transcript_23650~~R_Transcript_23650.p1 ORF type:complete len:372 (+),score=42.81,Sina|PF03145.12|6.3e-15 R_Transcript_23650:98-1117(+)
MAKFSILRDEEEDEADEEFCIRSPKRRRTSHSQPLPIASAPPNYEDHQQQQQQQQQQRSAEGDDDNDTRFFEGPTNSGSMSVILSDPDVLDCSICFNPLTSPVFQCDNGHIACSSCCTKLGNKCPSCCGKIGYNRCRAIEKVIESVRVPCCYLRYGCRETVSYCKKDEHEEICIYAPCSCPFPDCIFRGSSRNLSQHVRIEHADFVIRFCYDSIFPVSVRMDEKFIVLQEERDGTLFILSHGNTVTARCIDPSLSKGRFGYDIVLCKGGSSLRFRSSTHCSTGQVRDSPSVDYFLVPGYFYHTGGHLKLDICIWSMHLSPKDTTRAVNDLQTADNQWRS*

Click here to download the sequence:
Link to NCBI Protein BLAST