Transcript Information: R_Transcript_23672.p1


Annotated TAIR IDAT5G24350.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8301537-8310746 | Forward length=2396
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0298735672009
Replicate 22.0860621576774
Replicate 32.331380401547
Condition 2: 8 Hour
Replicate 12.3140922446104
Replicate 23.9736623627309
Replicate 33.8048004491037
Condition 3: 24 Hour
Replicate 13.4492343653901
Replicate 21.514294834975
Replicate 32.8818221841391


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23672.p1 GENE.R_Transcript_23672~~R_Transcript_23672.p1 ORF type:complete len:2476 (+),score=455.77,Sec39|PF08314.7|1.3e-09,Sec39|PF08314.7|1.6e-13,Sec39|PF08314.7|3.7e+02 R_Transcript_23672:241-7428(+)
ATGGAGGAAGAAACCTTGGCCGAGGTTCTGTACGAGACACGTCATCACGCTTCTGGTCCTTGTTCCCCGAATTACCCTCCCCGACAGGTCAATGATAATGCCAGTAAGGGAGTCCTATTGCTACTATCAATTCGAGGTTTATCTCAACTTAAAGAGAAATGGATTGGGAATAAACGACCAAAAAAATCAAAGAGGTGGATGTCATTATTTGTATCTCCAAAAGGTGAACGTGTAGCAGTGGCAGTTGGAAATCATGTAACTTTTCTGCGAAAGGATGAGGACTATCAGCTACCATGCGGAATATTTACAAGTAGTGACGTCAATGCATTTACACTTGGAGCATGGTCAGAATCTCACGATGTCCTTGGAGTTGTCGATGATATGGATACACTATACTTCATCAAATCAAATGGTGAAGAAATAGTTAGAATTGAGCAAAGGCATTTAAGATTATCATTTCCGGTTGTAGGCCTTTTTGTTCCTAATGATATAGAGATGAAGAAATCTTACCTGTGTAACTTCAATTTTCTTACTTCAGATGGATCTCTTCATCAACTAGAGATCAGCCAGGATGTTGGGGCTTGTCTCTCATCAATGCGTAGCTGGAATGACATTAAGAGGCAGCTACCATTGAATTTTTTCTGTTTAGACTACAATCTGGAACATTCCTTACTTGCTTTAGTTGGTAGTGCTACTGCTATGCTGGCTTCAAGCAGTGGTTCTGGATTGTGTTCTCTCTCTCTATGGCATTGGAGCCAAAACTCGAATTTGCAACAGCTCAGTTCTATAGAGTTTCAGGGTTCTTATAGCAAACCAAAGGGATCCACAGGCCACATGGTACCTCCAAAGGTGCAGATCTCTCCGCATGGAAAATTCATTGGTATCCTTGATTTCCAAGGATGCATGAACATAATTAAGGTGGATCATGAACACTCTTCGCTTTCTGTTATTGCTTGTGGAGGGTGTGTAAACAGAAAACAAACCAGTAACAGAGTTTTTGAGGATGGAGATCTTTTATTTGACATTGTTGACTTCACTTGGTGGTCTGACCATATCTGCGCTATTGCGAAAACGGGTGGTGCCATGACCATGTTTGACGTCATTAATGGCAAAAAGCTACTAGAGAATAATCCTATGTTTTCAGTGCCTCTTGTGGAAAGAACAAATCATCTCTCAGGTGAATTGTTTGTTTTAGATATTCCATTGCTCAAGGAGAGTCTAAATTCTCCTGATAATTCGGAAATAGGATATATTCATGATTTAGAACAGTATACTGAAGGAAATATTGATCAATTGGAGATATCTAGACTTTCCTGGAGCTTAGTGTCATTCTTGGAGAGATCTGTTCCAGAAATGTATGATGTTCTTATCAATAGTCAGAGCTATCAGTCTGCATTAGACTTTGCTGATCGGTACAAATTGGATAAGGATCAAGTATACAAGTCTCAGTGGGTGAAATCTGAGAAAGGGACTGATGACGTGCGTAGGTTTCTATCTAATATCAAGGATGAAGCTTTCATACTTGGTGAATGTGTTGAGAGAGTTCCCCGCACTGAAGATGCAGTCAAAAGTTTACTTGTATTTGGGCTTGATCTGACTAACCGCTACAAGTTTTCTCAACCTGAAGATGATAAATTTGATAATGTCTGGGACTACCGGTTGGCACGACTGCAACTCTTGCAATTCAAGGATAGGCTGGAAACATTCATTGGCATAAACATGGGCAGGTTTTCTGTGCAGGAATATGGTAAATTCCGTGTGATGCCTCTCCATGAAGCTGCTATTAAACTTGCTGAGAATGGAAAAATTGGAGCCTTGAACCTGTTATTCAAGCGACACCCATTTTCCTTGTCTCCTTTTATTTTGAACATATTGGCTGCTATACCTGAAACAATTCAAGTGCAAACATATAGGCAGCTCCTTCCTGGAAGGTCTCCTCCTTCAAGTAGTGTGCTTCGGGATAGAGATTGGGTCGAATGTGAAGATATGGTGAATTATTTAAGAAGCTTGCCTGATAATGATGGGAGAGCTATGATAGTTAGAACAGAACCCATTATCAAGCAATTGTTGGGAATCTCTTGGCCCTCAACTAATCATATTTTGGTGTGGTACAAGGACAGAGCTCGAGATATTGATAAATTTAGTGGGCAGCTGGAGAATAGCCTCTGTTTACTTGACTATGGTTGCCACAAGGGCATGTATGAATTGCAACCATTTCTTAATGATGTTTCATACTTGCAACAGCTTGTTTATTCTGAAGGTGGTGAGGAGGACATGCATTGTCCTATCAGCCTTATTGAATGGGAAGGTCTATCTGATTATGATAAATTTAGAACTATGCTTAAGGATGTCAAGGAGGAAAATGTTATTGAAAGGCTATGTGTTCGTGCAGTTCCATTCATGCAGAATAAATTGAATGCCTCTTTGGATGGAGAACATCAAAGGGGAGATACATTTATGGTTAGATGGTTGAAGGAGATAGCAGCACAAAACAATATTGAAATATGCTCTGTTGTTATTGATGAATGGTGCCGAGACTCACAATGTGGGTTTTTTACAAATGAGGTAGAAGCTATGGACTGTGCTTTACAGTGCATATACCTTTGTGGTGCTACTGATAGGTGGAATACTATGGCGTCCATTTTATCAAAGCTTCCGATTGGAAGAGGTGGTGAAAATCATTATGGGGTTCTTGAGAAAAGACTCAAACAGGCAGAGGGTCATATTGAAGCAGGCAGACTGTTGGCACTTTACCAGGTCCCGAAACCAGTGAATTTCTTTCTGGAGGCTCATAATGATGATAAGGGTGTAAAACAGATTCTTCGTCTTATACTATCGAAGTTTGCCAGACGCCAACCTGGCCGATCAGACAATGATTGGGCCAGTATGTGGCGTGACTTGCAATGTTTGCAGGAAAAGGCATTTCCGTTTTTGGACCCAGAGTATATGTTGATGGAGTTCTGTAGAGGGCTGCTGAAAGCTGGGAGATTTTCTCTGGCTAGAAACTACTTAAAAGGTATAGGTACAGTCAGTTTGCCAACTGAGAAGGCAGAAAACCTGGTAATTCAAACTGCAAGGGAGTACTTCTTCTCCGCTTCAAGTCTATCCTCCTCAGAGATCTGGAAGGCTAAGGACTGTCTTGACCTCTTCCCAAGCAGCCTAAATGTTAGATTGGAGGCTGATGTCATTGATGCCTTGACAGTTAAACTGCCAAACCTTGGTGTTTATATTCTTCCTGTGCAATATAAGCAAATAAAGGATCCTATGGAAATTATGAAGATGGCTATTACTAATCAGGCTGGTGCATATCTAAACGTTGAAGAACTCATTGATATTGCCAAACTTCTTGGATTACGTTCTCAGGAAGATATATCTGCCGTTCAAGAAGCTATAGCGAGAGAAGCTGCAGTAGCAGGCGATCTACAATTGGCTTTTGATCTATGCCTTGTTTTGGCTAGAAAAGGTCATGGTCATGTTTGGGATCTCTGTGCTGCAATAGCCAGGGGCCCTGCGATTGAGAACATGGATGTTAATTCTAGAAAGCAACTATTAAGCTTTGCATTGTGCCATTGCGATGATGAATCCATTGGTGACTTGTTACTTGCCTGGAAAGATTTGGATATGCAAGGTCAATCTGAGTCTCTAATGATGTTAACTCGCACAACTCCTAACTTTTCTGTTCAAGGATCTTCAATTGTTTCACCTTCTAGTCACAGAGCTCAGTCTGCAGTGTCTGCTGGATTTGCTGAAGATCAAGAAACACATTTAAGTAAACTTAGAGACATTCTTTCAAAGGTTGCCAAAAACCTCCCTGTGGCCAACGGGTCCAGTTGGGATGATGTCCTCAGGGAGAATGCAAAAGTTCAATCTTTTACTAGTTTGCAGCTTCCATGGTTAATTGATTTGAGCTGTAATTCAGAATTTGGAAAGAAATTTCATCCAATTTCCGTTCCTGGAAAGCCGTATGTGTCAGTGAGAACCCAGGCTGTAACGACTATCTTGTCTTGGATGGCGAGGAATGGATTTGCTCCAAGAGATGATCTGATCTCCACTCTGGCGAAATCTATTATGGAACCACCAGTTACAGAGGAGGAGGATGTTATGGGTTGTTCGTTCCTTCTTAATCTCATTGATGCTTTTCATGGGGTAGAAGTCATTGAAGAACAGCTGAAGACAAGGGAGGATTACCAAGAAACCTGTAGCATTATGCATGTGGAAATGGCATATAGTTTACTACACAATACTGGTGTTGAGTGTAAGGATCCACTTCAGAGGAGGGAGCTGTTGTTGAGAAAGTTCCAGGAAAGATTTAGTTCAGATGATCTAGATAAAGTTGACAAAGCACAATCCACATTTTGGAGAGGTTGGAAACTGAAACTGGAAGAACAAAAGCGTGCAGCAGATCGTACAAAAATGTTGGAAGAACTAATTCCTGGGGTTGACTCAGCCCTCTTTTTATCTGGGGATTTGTACTACATGAGAAATGTTGTCATGTCCTTTATTGAATCCGTGAAATTGCAGAAGAAAGCTATTTTGAGAGATGTACTCAAAATAGCTGACACATATAGCTTTAATCGTACAGAGGCCTTATTGAAGTTCCTTACCTGTGTTCTAGTTTCTGAGGTTTGGAGCAATGAGGAAATAGCTGATGAAATTTCGGAATTTAAGGGGGAAATACTTGATTCTGCTGTGGATACTGTCAAAATCTTAGTCTCTGCTGTCTACCCGGAAATTGATGGGTGCAATAAGGGTCGGCTAGCTTATATTTTTTCCCTGCTTTCAGAATGTTACTCCCATCTGGAGGAAAGAAAGGGCTTGCAACCCAACAATGCAGCACATACTCCTGCAAATTTAGGTCATTTTTACAGAATCCTAGAGCATGAATGTTGCCGTGTCTGCTTCATTAAGGATCTGAACTTCAAAAACATTGTTGATGTCAATATAGGAAATCTAAACTTCAAATATTTCAACCATGAAGTCTACAAACATGTTGATGATTTTAGTGTGGAAGCTTTGGCAAAAATGGTTCAAACACTTCTTACTACCTGCACGGGAACAATCCCTGAGAATGTCATATCATGGCAGGATGTGTATAGGCATCATGTTCAGACTACATTGAATAATTTAGAGGAGAGAGCTAGGAAATGCCATCTCCAAAATCCTGAAAGCCTGCAGAACTTGCTAAGTGAACTTGAGCAGAGCTATGATTCCTGCAGAAAGCATATTAGAGTCTTGGAACATCAGGCTGCTTTGGTCATAATGCAGCAGTATTTCACTAGAATTGTTCCGTTGCATGTCTACAGTGGAGGTATACCCAATGATCCAACATGGAAAGACTGTCTTATTGTGCTTCTCAACTTTTGGACAAAATTGATTGATGATTTGCTGGAACATGCCGAGAGCTCCGAAGAGAAGTTCAACACAGGTTGTTTAACGGTTTGCCTCAAAGTTTTCTTGAGGTTAGTTGTGGAGGGAAAAGTTACACCAAGTCAGGGATGGCGCAGTCTTTATTACTATGCTAATCATGGCTTAGTAATTAGTTGTCCTGCTGAAGATTTATATTTCTGTAGGGCAATGGTCATATCCAGATGTGGGTTTAGCGCAGTGGAGACATTATTCTCTGAAGCAATTTCACAATGCTTAACTGATGAAACAGTGAGCTCTAACACCAAGGGTGGAATTAATCATTTCCATGATGTTTGTGACTTGTACTTGAATCTCCTGGAAAATATTTTGTCAAACGTAGTTCATGATTCCAGTGAACGACAGAACTTGGGAAACTTACTATCTTCACTCAGTAGATTAGATGGTGACTTGGAAAGTCTGAAGAGGGTTCGAACTGCAATTTGGGAAAGAATAGCCAAGTTTTCTGATAATCTGCAACTTCCTAGTCATGTTCGAGTTTATGTTCTGGAAGTTATGCAATTCATTTTAGGTAGAAATGTGAGGGTTTCAGTGGAGCAGGATGACAATATTATTCCTTGGGATGGATGGGATGAATGGTGTTACAGGAGCAAGGACACTGAACATGCTGCAGAGCACGCTGTGAATGACCAAGCAGATGCATCTAATAGGTTTGAGAATACATTGGTAGCACTGAAGACAACCCAGCTTGCAACTTCAATTTCTTCCCACTTAGAAATCACAGCTGATGATCTTCTTACTGTTGATTCAGCAGTTTCTTGTTTCTCGAAATTGTGTGAAGCAGCTGACACAGAGTCTCAATTTGATGCTCTATTGGCTATCTTGAGGGAGTGGGAGAGCCTCTTTGTGGTGGAGAATAAAGAAGCTCCAGTAGGACCACCAGAAGCATCTGAGACAGGTCTAAGCTGGAGTGATGATTGGGATGAGGGCTGGGAAAGCTTTCATGATGAGGAACCAGCTCCGAAAGATAAGGTCGAATCTTCTCAGTCTATCCATCTTTTGCACACATGTTGGATAGGGATCCTAAAGAAGCTGGTAATGCTATCACAAGTAGATAAAGTGGCGACATTAATTGACCAATCCTTGAAAAGTCCCGATGTGGTGTTGGTTGACAAGGAAGATGCCAGTAACTTGAGCCAAATGTTAATCGGTTCTGATTGCATCACGGCCCTGAAAATAGTACTGATGCTGCCTTATGAAGCCATACAGTTGCGCTGTTTAAATGCAGTTGAAGACAAACTTAAACAAGGAGCTTTCCCAGAGACTACCGATGACAGAGACCTCTTAATTCTTGTTTTATCATCTGGGATCTGTTCCACTATCATCTCTAAACCTGCATTCGGAGCTATTTTCTCTTATCTCTGCTACTTGGTCGGGAATTTTTCACGCCAGTATCAAGGTGCTCAGCTCTCAAGGATTAGTCAGACTTCTGAACATGAGGGAGAAGAGGAAGAATTCCTCCTTACTTTCCGAAAACTTTTGTTCCCTTGTTTTGTGTCAGAGCTGGTTAAGGCAGATCAGCAGATCCTAGCCGGATTTCTTGTTACTAAATTCATGCACACAAATCCTTCTCTTTGTCTTATCAATATCGCTGAGGCTGGCCTGAAAAGATACTTGGATAAGCATCTCCAAGTACTAGAAAATCATAACTCTGCTGCTGAAAAGAGGAAACCGGAAATATTTCAACTCACTCTTCTTAGCTTGGAAAGCAAACTGAAGAGTTTGATCAGGTCTGCATTATCATTGCTTGCAAATAGTTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23672.p1 GENE.R_Transcript_23672~~R_Transcript_23672.p1 ORF type:complete len:2476 (+),score=455.77,Sec39|PF08314.7|1.3e-09,Sec39|PF08314.7|1.6e-13,Sec39|PF08314.7|3.7e+02 R_Transcript_23672:241-7428(+)
MEEETLAEVLYETRHHASGPCSPNYPPRQVNDNASKGVLLLLSIRGLSQLKEKWIGNKRPKKSKRWMSLFVSPKGERVAVAVGNHVTFLRKDEDYQLPCGIFTSSDVNAFTLGAWSESHDVLGVVDDMDTLYFIKSNGEEIVRIEQRHLRLSFPVVGLFVPNDIEMKKSYLCNFNFLTSDGSLHQLEISQDVGACLSSMRSWNDIKRQLPLNFFCLDYNLEHSLLALVGSATAMLASSSGSGLCSLSLWHWSQNSNLQQLSSIEFQGSYSKPKGSTGHMVPPKVQISPHGKFIGILDFQGCMNIIKVDHEHSSLSVIACGGCVNRKQTSNRVFEDGDLLFDIVDFTWWSDHICAIAKTGGAMTMFDVINGKKLLENNPMFSVPLVERTNHLSGELFVLDIPLLKESLNSPDNSEIGYIHDLEQYTEGNIDQLEISRLSWSLVSFLERSVPEMYDVLINSQSYQSALDFADRYKLDKDQVYKSQWVKSEKGTDDVRRFLSNIKDEAFILGECVERVPRTEDAVKSLLVFGLDLTNRYKFSQPEDDKFDNVWDYRLARLQLLQFKDRLETFIGINMGRFSVQEYGKFRVMPLHEAAIKLAENGKIGALNLLFKRHPFSLSPFILNILAAIPETIQVQTYRQLLPGRSPPSSSVLRDRDWVECEDMVNYLRSLPDNDGRAMIVRTEPIIKQLLGISWPSTNHILVWYKDRARDIDKFSGQLENSLCLLDYGCHKGMYELQPFLNDVSYLQQLVYSEGGEEDMHCPISLIEWEGLSDYDKFRTMLKDVKEENVIERLCVRAVPFMQNKLNASLDGEHQRGDTFMVRWLKEIAAQNNIEICSVVIDEWCRDSQCGFFTNEVEAMDCALQCIYLCGATDRWNTMASILSKLPIGRGGENHYGVLEKRLKQAEGHIEAGRLLALYQVPKPVNFFLEAHNDDKGVKQILRLILSKFARRQPGRSDNDWASMWRDLQCLQEKAFPFLDPEYMLMEFCRGLLKAGRFSLARNYLKGIGTVSLPTEKAENLVIQTAREYFFSASSLSSSEIWKAKDCLDLFPSSLNVRLEADVIDALTVKLPNLGVYILPVQYKQIKDPMEIMKMAITNQAGAYLNVEELIDIAKLLGLRSQEDISAVQEAIAREAAVAGDLQLAFDLCLVLARKGHGHVWDLCAAIARGPAIENMDVNSRKQLLSFALCHCDDESIGDLLLAWKDLDMQGQSESLMMLTRTTPNFSVQGSSIVSPSSHRAQSAVSAGFAEDQETHLSKLRDILSKVAKNLPVANGSSWDDVLRENAKVQSFTSLQLPWLIDLSCNSEFGKKFHPISVPGKPYVSVRTQAVTTILSWMARNGFAPRDDLISTLAKSIMEPPVTEEEDVMGCSFLLNLIDAFHGVEVIEEQLKTREDYQETCSIMHVEMAYSLLHNTGVECKDPLQRRELLLRKFQERFSSDDLDKVDKAQSTFWRGWKLKLEEQKRAADRTKMLEELIPGVDSALFLSGDLYYMRNVVMSFIESVKLQKKAILRDVLKIADTYSFNRTEALLKFLTCVLVSEVWSNEEIADEISEFKGEILDSAVDTVKILVSAVYPEIDGCNKGRLAYIFSLLSECYSHLEERKGLQPNNAAHTPANLGHFYRILEHECCRVCFIKDLNFKNIVDVNIGNLNFKYFNHEVYKHVDDFSVEALAKMVQTLLTTCTGTIPENVISWQDVYRHHVQTTLNNLEERARKCHLQNPESLQNLLSELEQSYDSCRKHIRVLEHQAALVIMQQYFTRIVPLHVYSGGIPNDPTWKDCLIVLLNFWTKLIDDLLEHAESSEEKFNTGCLTVCLKVFLRLVVEGKVTPSQGWRSLYYYANHGLVISCPAEDLYFCRAMVISRCGFSAVETLFSEAISQCLTDETVSSNTKGGINHFHDVCDLYLNLLENILSNVVHDSSERQNLGNLLSSLSRLDGDLESLKRVRTAIWERIAKFSDNLQLPSHVRVYVLEVMQFILGRNVRVSVEQDDNIIPWDGWDEWCYRSKDTEHAAEHAVNDQADASNRFENTLVALKTTQLATSISSHLEITADDLLTVDSAVSCFSKLCEAADTESQFDALLAILREWESLFVVENKEAPVGPPEASETGLSWSDDWDEGWESFHDEEPAPKDKVESSQSIHLLHTCWIGILKKLVMLSQVDKVATLIDQSLKSPDVVLVDKEDASNLSQMLIGSDCITALKIVLMLPYEAIQLRCLNAVEDKLKQGAFPETTDDRDLLILVLSSGICSTIISKPAFGAIFSYLCYLVGNFSRQYQGAQLSRISQTSEHEGEEEEFLLTFRKLLFPCFVSELVKADQQILAGFLVTKFMHTNPSLCLINIAEAGLKRYLDKHLQVLENHNSAAEKRKPEIFQLTLLSLESKLKSLIRSALSLLANSL*

Click here to download the sequence:
Link to NCBI Protein BLAST