Transcript Information: R_Transcript_23673.p1


Annotated TAIR IDAT5G24350.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8301537-8310746 | Forward length=2396
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0386613716439
Replicate 20.95819785726901
Replicate 31.2379541935471
Condition 2: 8 Hour
Replicate 11.6957784771311
Replicate 21.6291755384691
Replicate 32.7249215302823
Condition 3: 24 Hour
Replicate 11.1028570325558
Replicate 21.9953917170819
Replicate 31.7874666757914


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23673.p1 GENE.R_Transcript_23673~~R_Transcript_23673.p1 ORF type:complete len:2498 (+),score=453.15,Sec39|PF08314.7|1.3e-09,Sec39|PF08314.7|1.6e-13,Sec39|PF08314.7|3.8e+02 R_Transcript_23673:241-7494(+)
ATGGAGGAAGAAACCTTGGCCGAGGTTCTGTACGAGACACGTCATCACGCTTCTGGTCCTTGTTCCCCGAATTACCCTCCCCGACAGGTCAATGATAATGCCAGTAAGGGAGTCCTATTGCTACTATCAATTCGAGGTTTATCTCAACTTAAAGAGAAATGGATTGGGAATAAACGACCAAAAAAATCAAAGAGGTGGATGTCATTATTTGTATCTCCAAAAGGTGAACGTGTAGCAGTGGCAGTTGGAAATCATGTAACTTTTCTGCGAAAGGATGAGGACTATCAGCTACCATGCGGAATATTTACAAGTAGTGACGTCAATGCATTTACACTTGGAGCATGGTCAGAATCTCACGATGTCCTTGGAGTTGTCGATGATATGGATACACTATACTTCATCAAATCAAATGGTGAAGAAATAGTTAGAATTGAGCAAAGGCATTTAAGATTATCATTTCCGGTTGTAGGCCTTTTTGTTCCTAATGATATAGAGATGAAGAAATCTTACCTGTGTAACTTCAATTTTCTTACTTCAGATGGATCTCTTCATCAACTAGAGATCAGCCAGGATGTTGGGGCTTGTCTCTCATCAATGCGTAGCTGGAATGACATTAAGAGGCAGCTACCATTGAATTTTTTCTGTTTAGACTACAATCTGGAACATTCCTTACTTGCTTTAGTTGGTAGTGCTACTGCTATGCTGGCTTCAAGCAGTGGTTCTGGATTGTGTTCTCTCTCTCTATGGCATTGGAGCCAAAACTCGAATTTGCAACAGCTCAGTTCTATAGAGTTTCAGGGTTCTTATAGCAAACCAAAGGGATCCACAGGCCACATGGTACCTCCAAAGGTGCAGATCTCTCCGCATGGAAAATTCATTGGTATCCTTGATTTCCAAGGATGCATGAACATAATTAAGGTGGATCATGAACACTCTTCGCTTTCTGTTATTGCTTGTGGAGGGTGTGTAAACAGAAAACAAACCAGTAACAGAGTTTTTGAGGATGGAGATCTTTTATTTGACATTGTTGACTTCACTTGGTGGTCTGACCATATCTGCGCTATTGCGAAAACGGGTGGTGCCATGACCATGTTTGACGTCATTAATGGCAAAAAGCTACTAGAGAATAATCCTATGTTTTCAGTGCCTCTTGTGGAAAGAACAAATCATCTCTCAGGTGAATTGTTTGTTTTAGATATTCCATTGCTCAAGGAGAGTCTAAATTCTCCTGATAATTCGGAAATAGGATATATTCATGATTTAGAACAGTATACTGAAGGAAATATTGATCAATTGGAGATATCTAGACTTTCCTGGAGCTTAGTGTCATTCTTGGAGAGATCTGTTCCAGAAATGTATGATGTTCTTATCAATAGTCAGAGCTATCAGTCTGCATTAGACTTTGCTGATCGGTACAAATTGGATAAGGATCAAGTATACAAGTCTCAGTGGGTGAAATCTGAGAAAGGGACTGATGACGTGCGTAGGTTTCTATCTAATATCAAGGATGAAGCTTTCATACTTGGTGAATGTGTTGAGAGAGTTCCCCGCACTGAAGATGCAGTCAAAAGTTTACTTGTATTTGGGCTTGATCTGACTAACCGCTACAAGTTTTCTCAACCTGAAGATGATAAATTTGATAATGTCTGGGACTACCGGTTGGCACGACTGCAACTCTTGCAATTCAAGGATAGGCTGGAAACATTCATTGGCATAAACATGGGCAGGTTTTCTGTGCAGGAATATGGTAAATTCCGTGTGATGCCTCTCCATGAAGCTGCTATTAAACTTGCTGAGAATGGAAAAATTGGAGCCTTGAACCTGTTATTCAAGCGACACCCATTTTCCTTGTCTCCTTTTATTTTGAACATATTGGCTGCTATACCTGAAACAATTCAAGTGCAAACATATAGGCAGCTCCTTCCTGGAAGGTCTCCTCCTTCAAGTAGTGTGCTTCGGGATAGAGATTGGGTCGAATGTGAAGATATGGTGAATTATTTAAGAAGCTTGCCTGATAATGATGGGAGAGCTATGATAGTTAGAACAGAACCCATTATCAAGCAATTGTTGGGAATCTCTTGGCCCTCAACTAATCATATTTTGGTGTGGTACAAGGACAGAGCTCGAGATATTGATAAATTTAGTGGGCAGCTGGAGAATAGCCTCTGTTTACTTGACTATGGTTGCCACAAGGGCATGTATGAATTGCAACCATTTCTTAATGATGTTTCATACTTGCAACAGCTTGTTTATTCTGAAGGTGGTGAGGAGGACATGCATTGTCCTATCAGCCTTATTGAATGGGAAGGTCTATCTGATTATGATAAATTTAGAACTATGCTTAAGGATGTCAAGGAGGAAAATGTTATTGAAAGGCTATGTGTTCGTGCAGTTCCATTCATGCAGAATAAATTGAATGCCTCTTTGGATGGAGAACATCAAAGGGGAGATACATTTATGGTTAGATGGTTGAAGGAGATAGCAGCACAAAACAATATTGAAATATGCTCTGTTGTTATTGATGAATGGTGCCGAGACTCACAATGTGGGTTTTTTACAAATGAGGTAGAAGCTATGGACTGTGCTTTACAGTGCATATACCTTTGTGGTGCTACTGATAGGTGGAATACTATGGCGTCCATTTTATCAAAGCTTCCGATTGGAAGAGGTGGTGAAAATCATTATGGGGTTCTTGAGAAAAGACTCAAACAGGCAGAGGGTCATATTGAAGCAGGCAGACTGTTGGCACTTTACCAGGTCCCGAAACCAGTGAATTTCTTTCTGGAGGCTCATAATGATGATAAGGGTGTAAAACAGATTCTTCGTCTTATACTATCGAAGTTTGCCAGACGCCAACCTGGCCGATCAGACAATGATTGGGCCAGTATGTGGCGTGACTTGCAATGTTTGCAGGAAAAGGCATTTCCGTTTTTGGACCCAGAGTATATGTTGATGGAGTTCTGTAGAGGGCTGCTGAAAGCTGGGAGATTTTCTCTGGCTAGAAACTACTTAAAAGGTATAGGTACAGTCAGTTTGCCAACTGAGAAGGCAGAAAACCTGGTAATTCAAACTGCAAGGGAGTACTTCTTCTCCGCTTCAAGTCTATCCTCCTCAGAGATCTGGAAGGCTAAGGACTGTCTTGACCTCTTCCCAAGCAGCCTAAATGTTAGATTGGAGGCTGATGTCATTGATGCCTTGACAGTTAAACTGCCAAACCTTGGTGTTTATATTCTTCCTGTGCAATATAAGCAAATAAAGGATCCTATGGAAATTATGAAGATGGCTATTACTAATCAGGCTGGTGCATATCTAAACGTTGAAGAACTCATTGATATTGCCAAACTTCTTGGATTACGTTCTCAGGAAGATATATCTGCCGTTCAAGAAGCTATAGCGAGAGAAGCTGCAGTAGCAGGCGATCTACAATTGGCTTTTGATCTATGCCTTGTTTTGGCTAGAAAAGGTCATGGTCATGTTTGGGATCTCTGTGCTGCAATAGCCAGGGGCCCTGCGATTGAGAACATGGATGTTAATTCTAGAAAGCAACTATTAAGCTTTGCATTGTGCCATTGCGATGATGAATCCATTGGTGACTTGTTACTTGCCTGGAAAGATTTGGATATGCAAGGTCAATCTGAGTCTCTAATGATGTTAACTCGCACAACTCCTAACTTTTCTGTTCAAGGATCTTCAATTGTTTCACCTTCTAGTCACAGAGCTCAGTCTGCAGTGTCTGCTGGATTTGCTGAAGATCAAGAAACACATTTAAGTAAACTTAGAGACATTCTTTCAAAGGTTGCCAAAAACCTCCCTGTGGCCAACGGGTCCAGTTGGGATGATGTCCTCAGGGAGAATGCAAAAGTTCAATCTTTTACTAGTTTGCAGCTTCCATGGTTAATTGATTTGAGCTGTAATTCAGAATTTGGAAAGAAATTTCATCCAATTTCCGTTCCTGGAAAGCCGTATGTGTCAGTGAGAACCCAGGCTGTAACGACTATCTTGTCTTGGATGGCGAGGAATGGATTTGCTCCAAGAGATGATCTGATCTCCACTCTGGCGAAATCTATTATGGAACCACCAGTTACAGAGGAGGAGGATGTTATGGGTTGTTCGTTCCTTCTTAATCTCATTGATGCTTTTCATGGGGTAGAAGTCATTGAAGAACAGCTGAAGACAAGGGAGGATTACCAAGAAACCTGTAGCATTATGCATGTGGAAATGGCATATAGTTTACTACACAATACTGGTGTTGAGTGTAAGGATCCACTTCAGAGGAGGGAGCTGTTGTTGAGAAAGTTCCAGGAAAGATTTAGTTCAGATGATCTAGATAAAGTTGACAAAGCACAATCCACATTTTGGAGAGGTTGGAAACTGAAACTGGAAGAACAAAAGCGTGCAGCAGATCGTACAAAAATGTTGGAAGAACTAATTCCTGGGGTTGACTCAGCCCTCTTTTTATCTGGGGATTTGTACTACATGAGAAATGTTGTCATGTCCTTTATTGAATCCGTGAAATTGCAGAAGAAAGCTATTTTGAGAGATGTACTCAAAATAGCTGACACATATAGCTTTAATCGTACAGATATAAAACTTATCTGCATCTCTCTGAATGAGCTGACTACCTTCATAATATTTCAGGTTCATTATAACGCCTTATTGAAGTTCCTTAACTGTGCTCTAGTTTCTGAGGTTTGGAGCAATGAGGAAATAGCTGATGAAATTTCGGAATTTAAGGGGGAAATACTTGATTCTGCTGTGGATACTGTCAAAATCTTAGTCTCTGCTGTCTACCCGGAAATTGATGGGTGCAATAAGGGTCGGCTAGCTTATATTTTTTCCCTGCTTTCAGAATGTTACTCCCATCTGGAGGAAAGAAAGGGCTTGCAACCCAACAATGCAGCACATACTCCTGCAAATTTAGGTCATTTTTACAGAATCCTAGAGCATGAATGTTGCCGTGTCTGCTTCATTAAGGATCTGAACTTCAAAAACATTGTTGATGTCAATATAGGAAATCTAAACTTCAAATATTTCAACCATGAAGTCTACAAACATGTTGATGATTTTAGTGTGGAAGCTTTGGCAAAAATGGTTCAAACACTTCTTACTACCTGCACGGGAACAATCCCTGAGAATGTCATATCATGGCAGGATGTGTATAGGCATCATGTTCAGACTACATTGAATAATTTAGAGGAGAGAGCTAGGAAATGCCATCTCCAAAATCCTGAAAGCCTGCAGAACTTGCTAAGTGAACTTGAGCAGAGCTATGATTCCTGCAGAAAGCATATTAGAGTCTTGGAACATCAGGCTGCTTTGGTCATAATGCAGCAGTATTTCACTAGAATTGTTCCGTTGCATGTCTACAGTGGAGGTATACCCAATGATCCAACATGGAAAGACTGTCTTATTGTGCTTCTCAACTTTTGGACAAAATTGATTGATGATTTGCTGGAACATGCCGAGAGCTCCGAAGAGAAGTTCAACACAGGTTGTTTAACGGTTTGCCTCAAAGTTTTCTTGAGGTTAGTTGTGGAGGGAAAAGTTACACCAAGTCAGGGATGGCGCAGTCTTTATTACTATGCTAATCATGGCTTAGTAATTAGTTGTCCTGCTGAAGATTTATATTTCTGTAGGGCAATGGTCATATCCAGATGTGGGTTTAGCGCAGTGGAGACATTATTCTCTGAAGCAATTTCACAATGCTTAACTGATGAAACAGTGAGCTCTAACACCAAGGGTGGAATTAATCATTTCCATGATGTTTGTGACTTGTACTTGAATCTCCTGGAAAATATTTTGTCAAACGTAGTTCATGATTCCAGTGAACGACAGAACTTGGGAAACTTACTATCTTCACTCAGTAGATTAGATGGTGACTTGGAAAGTCTGAAGAGGGTTCGAACTGCAATTTGGGAAAGAATAGCCAAGTTTTCTGATAATCTGCAACTTCCTAGTCATGTTCGAGTTTATGTTCTGGAAGTTATGCAATTCATTTTAGGTAGAAATGTGAGGGTTTCAGTGGAGCAGGATGACAATATTATTCCTTGGGATGGATGGGATGAATGGTGTTACAGGAGCAAGGACACTGAACATGCTGCAGAGCACGCTGTGAATGACCAAGCAGATGCATCTAATAGGTTTGAGAATACATTGGTAGCACTGAAGACAACCCAGCTTGCAACTTCAATTTCTTCCCACTTAGAAATCACAGCTGATGATCTTCTTACTGTTGATTCAGCAGTTTCTTGTTTCTCGAAATTGTGTGAAGCAGCTGACACAGAGTCTCAATTTGATGCTCTATTGGCTATCTTGAGGGAGTGGGAGAGCCTCTTTGTGGTGGAGAATAAAGAAGCTCCAGTAGGACCACCAGAAGCATCTGAGACAGGTCTAAGCTGGAGTGATGATTGGGATGAGGGCTGGGAAAGCTTTCATGATGAGGAACCAGCTCCGAAAGATAAGGTCGAATCTTCTCAGTCTATCCATCTTTTGCACACATGTTGGATAGGGATCCTAAAGAAGCTGGTAATGCTATCACAAGTAGATAAAGTGGCGACATTAATTGACCAATCCTTGAAAAGTCCCGATGTGGTGTTGGTTGACAAGGAAGATGCCAGTAACTTGAGCCAAATGTTAATCGGTTCTGATTGCATCACGGCCCTGAAAATAGTACTGATGCTGCCTTATGAAGCCATACAGTTGCGCTGTTTAAATGCAGTTGAAGACAAACTTAAACAAGGAGCTTTCCCAGAGACTACCGATGACAGAGACCTCTTAATTCTTGTTTTATCATCTGGGATCTGTTCCACTATCATCTCTAAACCTGCATTCGGAGCTATTTTCTCTTATCTCTGCTACTTGGTCGGGAATTTTTCACGCCAGTATCAAGGTGCTCAGCTCTCAAGGATTAGTCAGACTTCTGAACATGAGGGAGAAGAGGAAGAATTCCTCCTTACTTTCCGAAAACTTTTGTTCCCTTGTTTTGTGTCAGAGCTGGTTAAGGCAGATCAGCAGATCCTAGCCGGATTTCTTGTTACTAAATTCATGCACACAAATCCTTCTCTTTGTCTTATCAATATCGCTGAGGCTGGCCTGAAAAGATACTTGGATAAGCATCTCCAAGTACTAGAAAATCATAACTCTGCTGCTGAAAAGAGGAAACCGGAAATATTTCAACTCACTCTTCTTAGCTTGGAAAGCAAACTGAAGAGTTTGATCAGGTCTGCATTATCATTGCTTGCAAATAGTTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23673.p1 GENE.R_Transcript_23673~~R_Transcript_23673.p1 ORF type:complete len:2498 (+),score=453.15,Sec39|PF08314.7|1.3e-09,Sec39|PF08314.7|1.6e-13,Sec39|PF08314.7|3.8e+02 R_Transcript_23673:241-7494(+)
MEEETLAEVLYETRHHASGPCSPNYPPRQVNDNASKGVLLLLSIRGLSQLKEKWIGNKRPKKSKRWMSLFVSPKGERVAVAVGNHVTFLRKDEDYQLPCGIFTSSDVNAFTLGAWSESHDVLGVVDDMDTLYFIKSNGEEIVRIEQRHLRLSFPVVGLFVPNDIEMKKSYLCNFNFLTSDGSLHQLEISQDVGACLSSMRSWNDIKRQLPLNFFCLDYNLEHSLLALVGSATAMLASSSGSGLCSLSLWHWSQNSNLQQLSSIEFQGSYSKPKGSTGHMVPPKVQISPHGKFIGILDFQGCMNIIKVDHEHSSLSVIACGGCVNRKQTSNRVFEDGDLLFDIVDFTWWSDHICAIAKTGGAMTMFDVINGKKLLENNPMFSVPLVERTNHLSGELFVLDIPLLKESLNSPDNSEIGYIHDLEQYTEGNIDQLEISRLSWSLVSFLERSVPEMYDVLINSQSYQSALDFADRYKLDKDQVYKSQWVKSEKGTDDVRRFLSNIKDEAFILGECVERVPRTEDAVKSLLVFGLDLTNRYKFSQPEDDKFDNVWDYRLARLQLLQFKDRLETFIGINMGRFSVQEYGKFRVMPLHEAAIKLAENGKIGALNLLFKRHPFSLSPFILNILAAIPETIQVQTYRQLLPGRSPPSSSVLRDRDWVECEDMVNYLRSLPDNDGRAMIVRTEPIIKQLLGISWPSTNHILVWYKDRARDIDKFSGQLENSLCLLDYGCHKGMYELQPFLNDVSYLQQLVYSEGGEEDMHCPISLIEWEGLSDYDKFRTMLKDVKEENVIERLCVRAVPFMQNKLNASLDGEHQRGDTFMVRWLKEIAAQNNIEICSVVIDEWCRDSQCGFFTNEVEAMDCALQCIYLCGATDRWNTMASILSKLPIGRGGENHYGVLEKRLKQAEGHIEAGRLLALYQVPKPVNFFLEAHNDDKGVKQILRLILSKFARRQPGRSDNDWASMWRDLQCLQEKAFPFLDPEYMLMEFCRGLLKAGRFSLARNYLKGIGTVSLPTEKAENLVIQTAREYFFSASSLSSSEIWKAKDCLDLFPSSLNVRLEADVIDALTVKLPNLGVYILPVQYKQIKDPMEIMKMAITNQAGAYLNVEELIDIAKLLGLRSQEDISAVQEAIAREAAVAGDLQLAFDLCLVLARKGHGHVWDLCAAIARGPAIENMDVNSRKQLLSFALCHCDDESIGDLLLAWKDLDMQGQSESLMMLTRTTPNFSVQGSSIVSPSSHRAQSAVSAGFAEDQETHLSKLRDILSKVAKNLPVANGSSWDDVLRENAKVQSFTSLQLPWLIDLSCNSEFGKKFHPISVPGKPYVSVRTQAVTTILSWMARNGFAPRDDLISTLAKSIMEPPVTEEEDVMGCSFLLNLIDAFHGVEVIEEQLKTREDYQETCSIMHVEMAYSLLHNTGVECKDPLQRRELLLRKFQERFSSDDLDKVDKAQSTFWRGWKLKLEEQKRAADRTKMLEELIPGVDSALFLSGDLYYMRNVVMSFIESVKLQKKAILRDVLKIADTYSFNRTDIKLICISLNELTTFIIFQVHYNALLKFLNCALVSEVWSNEEIADEISEFKGEILDSAVDTVKILVSAVYPEIDGCNKGRLAYIFSLLSECYSHLEERKGLQPNNAAHTPANLGHFYRILEHECCRVCFIKDLNFKNIVDVNIGNLNFKYFNHEVYKHVDDFSVEALAKMVQTLLTTCTGTIPENVISWQDVYRHHVQTTLNNLEERARKCHLQNPESLQNLLSELEQSYDSCRKHIRVLEHQAALVIMQQYFTRIVPLHVYSGGIPNDPTWKDCLIVLLNFWTKLIDDLLEHAESSEEKFNTGCLTVCLKVFLRLVVEGKVTPSQGWRSLYYYANHGLVISCPAEDLYFCRAMVISRCGFSAVETLFSEAISQCLTDETVSSNTKGGINHFHDVCDLYLNLLENILSNVVHDSSERQNLGNLLSSLSRLDGDLESLKRVRTAIWERIAKFSDNLQLPSHVRVYVLEVMQFILGRNVRVSVEQDDNIIPWDGWDEWCYRSKDTEHAAEHAVNDQADASNRFENTLVALKTTQLATSISSHLEITADDLLTVDSAVSCFSKLCEAADTESQFDALLAILREWESLFVVENKEAPVGPPEASETGLSWSDDWDEGWESFHDEEPAPKDKVESSQSIHLLHTCWIGILKKLVMLSQVDKVATLIDQSLKSPDVVLVDKEDASNLSQMLIGSDCITALKIVLMLPYEAIQLRCLNAVEDKLKQGAFPETTDDRDLLILVLSSGICSTIISKPAFGAIFSYLCYLVGNFSRQYQGAQLSRISQTSEHEGEEEEFLLTFRKLLFPCFVSELVKADQQILAGFLVTKFMHTNPSLCLINIAEAGLKRYLDKHLQVLENHNSAAEKRKPEIFQLTLLSLESKLKSLIRSALSLLANSL*

Click here to download the sequence:
Link to NCBI Protein BLAST