Transcript Information: R_Transcript_237179.p1


Annotated TAIR IDAT5G40820.1
Annotated Gene NameAtaxia telangiectasia-mutated and RAD3-related
Annotated Gene Symbol(s)ATRAD3, ATR, ATATR
Annotation TypeOrtholog
Chromosome Positionchr5:16343860-16353847 | Reverse length=2702
E-Value1e-310
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40997861519388
Replicate 20.20504199625291
Replicate 30.26843833120491
Condition 2: 8 Hour
Replicate 10.2152077973879
Replicate 20.39306237611459
Replicate 30.46088073840826
Condition 3: 24 Hour
Replicate 10.42597493879529
Replicate 20.32307508140494
Replicate 30.57711721342405


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_237179.p1 GENE.R_Transcript_237179~~R_Transcript_237179.p1 ORF type:3prime_partial len:1024 (+),score=211.55,UME|PF08064.9|1.8e+02,UME|PF08064.9|6.3e-15 R_Transcript_237179:184-3252(+)
ATGAATCATGAAGTTGTTGTATATGAGAAATTTATTCTCACAATAGCAATTATATTGAGTGAAGCTGATGGCAACCTTCCTGTATACAGAGATATGGCATTTGATTCCACTATAGGTAGTTGCCTTCATGCTTTGCACTCCAGATGTCCTTCTGCTATTGTTAAATCTACAGCTGTGGAGCTAGTTTCTGTGTTCAACAACTCGTTGACAAAAACAAAAAGTTCCGAGTTGCAGGTTGCTCTATGCAGTGCGTATGTGCGGATATCTAGGACTTGTCCTCCTAATGTCTGGAAGCCAGCATCTCTGATAAGTATGATTGATTCCCCTGACATCTGCTTCATGTTAAAGGATTGCTTCGAGGTGGCTGTTGGTGTTCTTGGTCCTGACTGTGTTGGAGGAGGCAGCATTAGTGATATTTCTCTGGGGCAGTCCGTAGCATATGATAATAACACAGGGAGTTTGAAAGCTGGGTGTAAAAGACCATCTGGGAATTCGGGAACTTCCAAAATCAAGCGTCTGAAAGTAGATGGGGAAATGGGATGTAGCTCTGATGGATGGGGAGCCTGCAGTTCCAGTCACCCATGGTCTGAGACAAATAAAAATTATGCTTCTGATATGTGGATGTCACTTCTTTCATATGTCGACTTGCTGAAACCTCCATGTGGCTATACCAATTTTATCAGGGAAGAAGTCGCCCTGGCAGCTCTTAGTATGCTTTGTACAGTCTTCTTAAAATATCCAAATACCAATTTATCACTCAGCATCTTTCAGAAGATCCATTTATGGATTCCATGGATTTGTAAGCAGGCAAATCAGGCCAACTCAGTAATGTTTGACTTGACAAGCTATCTGGAAGCATTGCACAACATACACTTGTTGCCAAGTTCATTTCCTGGGAATTTGAGAAACTCTTGGAGTGACAGTGATAATACAAATCTTATATATTCAATGCTTAAGCTCCCATGGACCCATTTTCTTGAGGTCAATAAAACCCATCAAACATGGAGAACAAAGTGCCTTTCTATCCAAGTGCTGTCCAAGATTGGTCCTAAATCAGAGTCTCAACTTGATGTTTTGGATATGGGTCTCTATGATGAGGTGGAAGAAGTTAGGTTGGAAGCTGTCATTTCTATGCCCTTAATCGTCTTGTCTTCTGGCTTTCATGCCTTTTTGCCTGTTTTTAGACGGTTGGACTTGCTTCAGAAAGAGGTGTGCGAGAATGTCAAAAGGAGAATTCCCTTTGCTCTCGGTTATTTGTCATGCTTGTACGGGTTTTGCCATGAATATGATGCAGATGTTACAAACGCTTATGACTATACAATATCCATTTATAGTGGTGAAAAGCAAAATGTGATGCTTGACTCTTTATTGGAAGGCTTTTCGTGTCCTAAGTGTGACCAAAGTGCTGATGTGTGTGATGCTTGGCATTATGCTGCTGACACAAGAGGCCTGAACACCGGTGGTTGCAACTTTATTCACATACAGTCGTTGTTCTTCAATCTTCTTAATGATGAGTCCTCAGAAGAGGTCCAAATTGCCTGCATTGAGGTACTTCATCGAGTCATTGTACACGTTGAGAGGGATGTTCTGCTGAAAACTAGATCTGAGTGGATCAAATGTATTGAAGTGTTACTCCTTCACAGAAAGAGGTCTTTGAGGGAAGCATTCTGCACCCAGATTAGGGTTTTCTTGAAAGAATCTATCTTGAGTTTCTTATTTCCAGAGAGTGAGATATTGAATGCAAGTAAAGAGCGTATGTTCCTTGACAAGATAAAAGTAGCTCTTGCAGCAACTGAAGATCCCCAAGTTATTGTGACTTTGTTGGAGTCTGCAGCAGAGATTATGATGGCCGTTGATATAAAGTATCCGCTTTTCCTATCGTCTCTTATTCTACTAGTTGATAGGCTTGATGATCCTCATCTGACAGTGACAGTAACTGCTGCAAGGTTAATTAATAGGTCTTGCTATTTCCATCTGAGAGGAGGGATTAGGCTAGTCCTTTCTAAGGTTTCGAATATTCGAAACGAGCTATTTGAGTATCTCTGCCCAAAAGTTGTAAGTCATCCTAAAGTGGTGAGGGAGTTTGCAGAAGCTGTTCTTGGCATTGAAACAAAAGAACTTGTTCTTGAAATGATACCAGTTGTCCTGCCAAAGCTTGTTGTCTCTCAGAAGCATGATGATCAATCAGTTGCTATTTTGGAAGAGTTGGCCAGGTGGTTGGAAATAGACATGGTGAAGCTGATTGTTGATTGGGTACCAAAAGTTCTCGCTTATACTCTTCGTCGAGCTGATGAAAAAGAGTTGTTTTCAGCTCTGCAGTTTTACCTTACGAGCACAGGATCTGACAAGCAAGAGATATTTGCTGCTGCATTACCTGCATTGTTAGAAGACTTAGTGTGCTTCGTGGATGGAAATGATCAAGATGAGATAAGTCAAAGGTTGGAAAGAGTACCTCAGATGATAGAAGAAGTTGCCAAAATTCTGATAGGAAGTGAAGATCTTCCTGGCCTTTTGAATCGTCATTTTGTTCGACTTCTTGACAGCATTGATCGGAAGATGCTTCATGCAGAGGATGTTTCTTTGCAGAAGCAAGCAATTCAACGAATCAAAATGTTGATAAATATGATGGGACAACACCTTAGCACATATGTGCCCAAACTGATGGTGCTTCTCATGCATGCAGTTGACAAGGAGGCACTGCGCAGTGAGGGTCTCTCTGTGCTACATTTATTCATCAAAGAGCTGGCAAAGTCATCACCGTCTAGTGCTAAACATGTGATATTTCAAATTTTTGCTGCTCTTATTCCATTTTTAGAGAAGGAACAAGATCAACCTTCATTGCATTTGGATAAGATTGTTAATATCTTAGAAGAGCTTGTTTATGAGAACAAGACAATACTGAAGCAGCATATCCGTGAGTTTCCTCTATTGCCCAGCACTCCAGCATTGGTAAAGGTGAACCAAGTAATACAAGAAGCAAGGGGGTCCATGACATTTAAGGATCAATTGCGAGATGCTGCTGATGGCTTGAATCATGAGAACTTGAATGTGAGGTACATGGTCGCTTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_237179.p1 GENE.R_Transcript_237179~~R_Transcript_237179.p1 ORF type:3prime_partial len:1024 (+),score=211.55,UME|PF08064.9|1.8e+02,UME|PF08064.9|6.3e-15 R_Transcript_237179:184-3252(+)
MNHEVVVYEKFILTIAIILSEADGNLPVYRDMAFDSTIGSCLHALHSRCPSAIVKSTAVELVSVFNNSLTKTKSSELQVALCSAYVRISRTCPPNVWKPASLISMIDSPDICFMLKDCFEVAVGVLGPDCVGGGSISDISLGQSVAYDNNTGSLKAGCKRPSGNSGTSKIKRLKVDGEMGCSSDGWGACSSSHPWSETNKNYASDMWMSLLSYVDLLKPPCGYTNFIREEVALAALSMLCTVFLKYPNTNLSLSIFQKIHLWIPWICKQANQANSVMFDLTSYLEALHNIHLLPSSFPGNLRNSWSDSDNTNLIYSMLKLPWTHFLEVNKTHQTWRTKCLSIQVLSKIGPKSESQLDVLDMGLYDEVEEVRLEAVISMPLIVLSSGFHAFLPVFRRLDLLQKEVCENVKRRIPFALGYLSCLYGFCHEYDADVTNAYDYTISIYSGEKQNVMLDSLLEGFSCPKCDQSADVCDAWHYAADTRGLNTGGCNFIHIQSLFFNLLNDESSEEVQIACIEVLHRVIVHVERDVLLKTRSEWIKCIEVLLLHRKRSLREAFCTQIRVFLKESILSFLFPESEILNASKERMFLDKIKVALAATEDPQVIVTLLESAAEIMMAVDIKYPLFLSSLILLVDRLDDPHLTVTVTAARLINRSCYFHLRGGIRLVLSKVSNIRNELFEYLCPKVVSHPKVVREFAEAVLGIETKELVLEMIPVVLPKLVVSQKHDDQSVAILEELARWLEIDMVKLIVDWVPKVLAYTLRRADEKELFSALQFYLTSTGSDKQEIFAAALPALLEDLVCFVDGNDQDEISQRLERVPQMIEEVAKILIGSEDLPGLLNRHFVRLLDSIDRKMLHAEDVSLQKQAIQRIKMLINMMGQHLSTYVPKLMVLLMHAVDKEALRSEGLSVLHLFIKELAKSSPSSAKHVIFQIFAALIPFLEKEQDQPSLHLDKIVNILEELVYENKTILKQHIREFPLLPSTPALVKVNQVIQEARGSMTFKDQLRDAADGLNHENLNVRYMVAC

Click here to download the sequence:
Link to NCBI Protein BLAST