Transcript Information: R_Transcript_237476.p1


Annotated TAIR IDAT2G42740.1
Annotated Gene Nameribosomal protein large subunit 16A
Annotated Gene Symbol(s)RPL16A
Annotation TypeOrtholog
Chromosome Positionchr2:17791794-17792946 | Forward length=182
E-Value2.3E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52754222412482
Replicate 20.1213658983601
Replicate 30.13240888783903
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.10492260474212
Condition 3: 24 Hour
Replicate 10.92892861614988
Replicate 20
Replicate 30.63259262100859


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_237476.p1 GENE.R_Transcript_237476~~R_Transcript_237476.p1 ORF type:5prime_partial len:173 (+),score=12.74,Ribosomal_L5_C|PF00673.17|4.3e+03,Ribosomal_L5_C|PF00673.17|5.8e-23,Ribosomal_L5|PF00281.15|4.1e-19,Ribosomal_L5|PF00281.15|2.7e+02 R_Transcript_237476:1-519(+)
CAGGAAGATAAGGCGAAGAACCCTATGCGTCAATTGAAGATTGACAAGATGATCATCAACTGTTGCGTTGGTGAGTCTGGTGATAGACTGACTCGTGCCGCCAAGGTGCTTGAGCAGCTGACCGACAAGAAGCCCGTTTACTCCAAGGCTCGCTACACCGTCAGAACCTTCGGCATCCGCAGAAACGAGAAGATTGCCGTGCACGTCACTGTCCGTGGCTTCAAGGCCAACGAGATCCTTGACCGCGCCCTGAAGGTGAAGGAGTACGAGCTGAAGAAGAAGAACTTCTCCGCCACCGGCTGCTTTGGTTTCGGTATCACCGAGCACATCGATTTGGGTCTGAAGTACGACCCCGCCACTGGTATTTTCGGTATGGACTTCTACATCATCCTGATCAGACCCGGATACAGAGTGTCCCGGCGCAAGATCAGACCCGGAAGAATCGGAAACCACCACAAGGTTAAGAAGGAGGATGCTATTAAGTGGTTCCAGGAGAAGTACGAGGGCATTGTTCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_237476.p1 GENE.R_Transcript_237476~~R_Transcript_237476.p1 ORF type:5prime_partial len:173 (+),score=12.74,Ribosomal_L5_C|PF00673.17|4.3e+03,Ribosomal_L5_C|PF00673.17|5.8e-23,Ribosomal_L5|PF00281.15|4.1e-19,Ribosomal_L5|PF00281.15|2.7e+02 R_Transcript_237476:1-519(+)
QEDKAKNPMRQLKIDKMIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRTFGIRRNEKIAVHVTVRGFKANEILDRALKVKEYELKKKNFSATGCFGFGITEHIDLGLKYDPATGIFGMDFYIILIRPGYRVSRRKIRPGRIGNHHKVKKEDAIKWFQEKYEGIVL*

Click here to download the sequence:
Link to NCBI Protein BLAST