Transcript Information: R_Transcript_237540.p1


Annotated TAIR IDAT5G25930.1
Annotated Gene NameProtein kinase family protein with leucine-rich repeat domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9050880-9053978 | Forward length=1005
E-Value2E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18314007646875
Replicate 20.070221740522736
Replicate 30.30644465011575
Condition 2: 8 Hour
Replicate 10.61419393680381
Replicate 20.59828446397821
Replicate 30.9713236452381
Condition 3: 24 Hour
Replicate 10.53747374780578
Replicate 20.073763407660794
Replicate 30.36601512854343


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_237540.p1 GENE.R_Transcript_237540~~R_Transcript_237540.p1 ORF type:internal len:598 (+),score=93.64,LRR_8|PF13855.2|0.0031,LRR_8|PF13855.2|0.0034,LRR_8|PF13855.2|9.5e-06,LRR_8|PF13855.2|6.7,LRR_8|PF13855.2|1.7,LRR_8|PF13855.2|0.01,LRR_8|PF13855.2|0.032,LRR_8|PF13855.2|0.47,LRR_4|PF12799.3|19,LRR_4|PF12799.3|0.031,LRR_4|PF12799.3|0.074,LRR_4|PF12799.3|0.11,LRR_4|PF12799.3|0.0029,LRR_4|PF12799.3|27,LRR_4|PF12799.3|1.6e+03,LRR_4|PF12799.3|2.5e+02,LRR_4|PF12799.3|4.5e+02,LRR_4|PF12799.3|2.5e+02,LRR_4|PF12799.3|0.097,LRR_4|PF12799.3|0.00086,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.035,Pkinase|PF00069.21|6.9e-16,Pkinase_Tyr|PF07714.13|5.2e-11,LRR_1|PF00560.29|3.7,LRR_1|PF00560.29|7.7e+02,LRR_1|PF00560.29|0.23,LRR_1|PF00560.29|5.9,LRR_1|PF00560.29|88,LRR_1|PF00560.29|2.1e+03,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|4.2e+03,LRR_1|PF00560.29|1.5e+03,LRR_1|PF00560.29|31,LRR_1|PF00560.29|9e+02,LRR_1|PF00560.29|2.7,LRR_1|PF00560.29|0.8,LRR_1|PF00560.29|8.2e+03,LRR_1|PF00560.29|1.6e+04 R_Transcript_237540:2-1792(+)
GATCTCATGAAGCTGCCCAGAGAATTTGGGAAGCTTAAGAGCTTGAAGTTCCTTTGGATGACCAAGTGTAATTTGATTGGGGAAATCCCAGAAAGTTTTCGTAATCTATCTAGCCTTGAGCAGTTAGATTTGGTGAAGAATGATTTGGTGGGTGAGATACCAAGTGGGTTGTTCTTGCTCAAGAATTTGACTTTCTTATACTTGTATAATAATAAGCTGTCCGGAGGGCTTCCTAACTCGATTGAGGCCTTGAGTTTGAAGGAAATCGATCTCTCGGCGAACAATTTGACAGGAACAATCCCAGATTGGATCGGAGACTTGCCAAGGTTGGAGATTTTGGATTTATTTAGCAATGATTTCTATGGAGTGTTACCACCAAATATAGGCCGTATTCCTACCTTGAAGGCATTAAAGCTGTGGAGCAACAGGTTCTCTGGTCCTCTACCCCCAGAATTAGGCCTACACTCAAACCTCGAGGAATTGCAGGTATCTGAAAATGGATTCACAGGCCAGCTGCCGGCAAATCTCTGTTCTGGTAAGACCTTGGTTGGTGTGGTGGCATTCGACAACAAGCTCAATGGGTCGATACCAAGTTCTTTAGGTCAATGCCACTCTTTGTTCACAGTTCAGCTCCACAAAAACAGCCTCTCAGGGGAAATACCTCAAGGGCTATGGACCTTGCAAAAGATATCAATATTGACATTCAGTGACAACCAATTGTCCGGCCAGCTACCGGAGAACTTGTCTTGGAATATGACCCAGGTTGAGATGAATAACAACAGATTTTCGGGAGAAATCCCATCGAGCGTAGGAACTTGGAAGAGTTTGGTGAAATTTCAGGCCAGCAACAACATGCTGTCAGGCACTATTCCATTGGAGCTGACTAGCCTTCCCCTCCTTGAGACTCTCATTTTGAGTGGAAATCAACTCACAGGTGAGCTTCCCTCTGAAATCATCTCATGGCAAAGCTTGAACAGCTTGATCCTGGCAGGGAACAAGCTTTCTGGACAGATCCCACCGCTTCTTGGCTTGTTGCCTGTCCTTAACTATCTCGATTTATCCAATAACCAGTTCTCCGGTCAAATTCCTCCTGAACTAGGTCATCTAAAGCTCAATTCTCTTAACCTTTCCTCTAATAAGCTCACAGGGAGCATTCCATACGCGTTTGATAATAATGCATATGGGGATAGCTTCTTCAATACCAACTTATGCTCTGATGGTGGAGTCTCAAATCTCCCAAAATGCTCGATTTATCATCAAAACTCCAAGAAAACGTCCTCAAAACACCTTGCTTTGATAGTAGTCCTTACATTAGTGGCTTTCCTAGCAACTTTATACTTCACTTGGTTCATAATCAAGATACTCCAGCAAAGAAAGCATCCCAAAGACCTAACAACATGGAAACTGACCTCATTTCACAAGGTAGACTTCACTGAAGAGAAAATCCTTGCCAACTTGACTGACAACAATATTATCGGGTCAGGAGGGTCTGGGCAAGTTTACCGCATACCCACAAACCAATCAGGGGACCTTGTGGCAGTAAAGAGGATATGGAACAACAAGAGATTGAGCAATACATTGGACAAAGAATTCCCAGCTGAGGTTCAAATTCTGGGTACAATAAGGCATCTAAACATAGTCAAGTTACTTTGCTATATATCAAACGAGGACTCAAAACTCCTTGTTTATGAGTACATGGAGAATCAGAGCCTGGACAAGTGGATCCATTCAGGGAAAAAGAGACCTGTTTCATCATCTATGTGTGGGTCTGTTATTGATTGGCCTGCAAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_237540.p1 GENE.R_Transcript_237540~~R_Transcript_237540.p1 ORF type:internal len:598 (+),score=93.64,LRR_8|PF13855.2|0.0031,LRR_8|PF13855.2|0.0034,LRR_8|PF13855.2|9.5e-06,LRR_8|PF13855.2|6.7,LRR_8|PF13855.2|1.7,LRR_8|PF13855.2|0.01,LRR_8|PF13855.2|0.032,LRR_8|PF13855.2|0.47,LRR_4|PF12799.3|19,LRR_4|PF12799.3|0.031,LRR_4|PF12799.3|0.074,LRR_4|PF12799.3|0.11,LRR_4|PF12799.3|0.0029,LRR_4|PF12799.3|27,LRR_4|PF12799.3|1.6e+03,LRR_4|PF12799.3|2.5e+02,LRR_4|PF12799.3|4.5e+02,LRR_4|PF12799.3|2.5e+02,LRR_4|PF12799.3|0.097,LRR_4|PF12799.3|0.00086,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.035,Pkinase|PF00069.21|6.9e-16,Pkinase_Tyr|PF07714.13|5.2e-11,LRR_1|PF00560.29|3.7,LRR_1|PF00560.29|7.7e+02,LRR_1|PF00560.29|0.23,LRR_1|PF00560.29|5.9,LRR_1|PF00560.29|88,LRR_1|PF00560.29|2.1e+03,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|4.2e+03,LRR_1|PF00560.29|1.5e+03,LRR_1|PF00560.29|31,LRR_1|PF00560.29|9e+02,LRR_1|PF00560.29|2.7,LRR_1|PF00560.29|0.8,LRR_1|PF00560.29|8.2e+03,LRR_1|PF00560.29|1.6e+04 R_Transcript_237540:2-1792(+)
DLMKLPREFGKLKSLKFLWMTKCNLIGEIPESFRNLSSLEQLDLVKNDLVGEIPSGLFLLKNLTFLYLYNNKLSGGLPNSIEALSLKEIDLSANNLTGTIPDWIGDLPRLEILDLFSNDFYGVLPPNIGRIPTLKALKLWSNRFSGPLPPELGLHSNLEELQVSENGFTGQLPANLCSGKTLVGVVAFDNKLNGSIPSSLGQCHSLFTVQLHKNSLSGEIPQGLWTLQKISILTFSDNQLSGQLPENLSWNMTQVEMNNNRFSGEIPSSVGTWKSLVKFQASNNMLSGTIPLELTSLPLLETLILSGNQLTGELPSEIISWQSLNSLILAGNKLSGQIPPLLGLLPVLNYLDLSNNQFSGQIPPELGHLKLNSLNLSSNKLTGSIPYAFDNNAYGDSFFNTNLCSDGGVSNLPKCSIYHQNSKKTSSKHLALIVVLTLVAFLATLYFTWFIIKILQQRKHPKDLTTWKLTSFHKVDFTEEKILANLTDNNIIGSGGSGQVYRIPTNQSGDLVAVKRIWNNKRLSNTLDKEFPAEVQILGTIRHLNIVKLLCYISNEDSKLLVYEYMENQSLDKWIHSGKKRPVSSSMCGSVIDWPAR

Click here to download the sequence:
Link to NCBI Protein BLAST