Transcript Information: R_Transcript_23765.p1


Annotated TAIR IDAT4G20325.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit B (InterPro:IPR019024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10980124-10982426 | Forward length=277
E-Value1.7E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.702620423421
Replicate 216.775938523575
Replicate 318.417477464243
Condition 2: 8 Hour
Replicate 111.197053820097
Replicate 210.000595396309
Replicate 313.408476186919
Condition 3: 24 Hour
Replicate 124.572929344226
Replicate 224.161037377617
Replicate 321.007796960791


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23765.p1 GENE.R_Transcript_23765~~R_Transcript_23765.p1 ORF type:5prime_partial len:199 (+),score=42.91,RNase_H2-Ydr279|PF09468.6|3.1e-11 R_Transcript_23765:1-597(+)
TTTATTCTACTACCAATATTTCAGGATGCTCGGATGAAGAAGGGGGATGATCCAGGGAAGTTCAGGCAATTAGATGAGATTATCTATGTTGATGGCTATCCTGGATATCAACGTTTGCTCCAGATTGCTGAGAAATCTATGAGTGTTGTTTGCGACATCAAAGAAATCGGGTCGACAAAGTTTTTCAGGCTTGATGATTCCAAGGTGCTTGCTTGGTTGTGTGCAAAGGTTAAACGGTTAAAACAGACTTTGCTCACATTGGACAAGAATTATGCTGGTCAGGATGACAGGCATACATTGGCTGAGGTGGTGTCAATATTGGGAGAGTATTTGAGGGATGAGCCTTGGATGGAACTTTTGTGTAGCCACCTCAGGCTCACTTTACAAGATTTGACAAGAAAAGCCGATGATCCTTGTTCATCTATGCCAGACGATGCGCTTCAATCCTCTCCTCAGGGAAACGGAGGAGTAGAGCTAACAAACAAGAAAACCGCCAAGACAGGGAGGCAAGCGAAGAAGGTGAAGGTGGAGAAAGACTCACATAATATAAAAGACATGTTCACCAGAGCAACAAGAAGCAAAGCCAAAGCCACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23765.p1 GENE.R_Transcript_23765~~R_Transcript_23765.p1 ORF type:5prime_partial len:199 (+),score=42.91,RNase_H2-Ydr279|PF09468.6|3.1e-11 R_Transcript_23765:1-597(+)
FILLPIFQDARMKKGDDPGKFRQLDEIIYVDGYPGYQRLLQIAEKSMSVVCDIKEIGSTKFFRLDDSKVLAWLCAKVKRLKQTLLTLDKNYAGQDDRHTLAEVVSILGEYLRDEPWMELLCSHLRLTLQDLTRKADDPCSSMPDDALQSSPQGNGGVELTNKKTAKTGRQAKKVKVEKDSHNIKDMFTRATRSKAKAT*

Click here to download the sequence:
Link to NCBI Protein BLAST