Transcript Information: R_Transcript_237664.p1


Annotated TAIR IDAT3G29230.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:11188803-11190605 | Forward length=600
E-Value1.3E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.72484682491663
Replicate 20.30319567388156
Replicate 30.49617482157731
Condition 2: 8 Hour
Replicate 10.53037974614972
Replicate 20.40362602601418
Replicate 30.52423424174403
Condition 3: 24 Hour
Replicate 11.0774422164627
Replicate 20.79621873251182
Replicate 30.71115285986309


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_237664.p1 GENE.R_Transcript_237664~~R_Transcript_237664.p1 ORF type:internal len:277 (+),score=32.34,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|3.8e-11,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|0.011,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|0.00057,PPR|PF01535.16|7.2,PPR|PF01535.16|9.3e-10,PPR|PF01535.16|0.11,PPR_3|PF13812.2|91,PPR_3|PF13812.2|0.0091,PPR_3|PF13812.2|6.9e+03,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|7e-05,PPR_3|PF13812.2|5.1,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|84,PPR_1|PF12854.3|3.9e-08,PPR_1|PF12854.3|0.049 R_Transcript_237664:3-830(+)
AAAGGTGGGCAACCACTATGTCACGACCAACTTGGTTACATTTGTCTCCTTTTTAAGTTTTCTTTCTTTGGGGGTGTAACTGTAACATTTATGTCCGAACTCCAACCATACAAGAGCAGCAGACCACCAATGACCACAACCCCCATTCGAGCCCCAACATGGGTCTCCACAAGAAGGCAATTGGAACAAAAGCTATCTGAGCTACACAAATGTACAAACTTAGCTCACATAAAGCAAGTTCAAGCTCAAATCTTCAAGGCCAATCTTCATCGAGACCCCTTTGTGGCCCCCAAACTTATCTCAGCTTTCTCTCTTTGCCGTCACATGGCCTTAGCCATCAATGTGTTTGAGCAAATTGAATACCCTAATGTTCATTTGTACAATACTTTAATTAGAGCTCATACCCAGAACTCACAGCCTTCCCAAGCATTGATTACCTTCCTTGATATGCAAAAAAATGGAGTCTTTGCTGATAATTTTACATACCCATTTCTTCTAAGGGCCTGTAGTAGCGGACCCTATGCTTTCCAAATGGTTCAAATGTTTCATACCCATATAGAGAAATTTGGTTTTTCTGCTGATATTTTTGTGCCCAACTCTTTGATTGATAGTTATTCTAAGTGTGGGGCAATTGGTCTTAGTTCAGCTAGGAAACTGTTCATGTATATGGAGGATAGGGATATTGTTTCTTGGAATTCTATGATTAGTGGCTTGGTTAAAGGGGGCAATTTGGAAGATGCTCGCCAACTGTTCGATGAAATGCCTGAGAGAGATGTTGTCAGCTGGAATACCATATTGGATGGATATGTTAAGGCAAATGACATGAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_237664.p1 GENE.R_Transcript_237664~~R_Transcript_237664.p1 ORF type:internal len:277 (+),score=32.34,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|3.8e-11,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|0.011,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|0.00057,PPR|PF01535.16|7.2,PPR|PF01535.16|9.3e-10,PPR|PF01535.16|0.11,PPR_3|PF13812.2|91,PPR_3|PF13812.2|0.0091,PPR_3|PF13812.2|6.9e+03,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|7e-05,PPR_3|PF13812.2|5.1,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|84,PPR_1|PF12854.3|3.9e-08,PPR_1|PF12854.3|0.049 R_Transcript_237664:3-830(+)
KGGQPLCHDQLGYICLLFKFSFFGGVTVTFMSELQPYKSSRPPMTTTPIRAPTWVSTRRQLEQKLSELHKCTNLAHIKQVQAQIFKANLHRDPFVAPKLISAFSLCRHMALAINVFEQIEYPNVHLYNTLIRAHTQNSQPSQALITFLDMQKNGVFADNFTYPFLLRACSSGPYAFQMVQMFHTHIEKFGFSADIFVPNSLIDSYSKCGAIGLSSARKLFMYMEDRDIVSWNSMISGLVKGGNLEDARQLFDEMPERDVVSWNTILDGYVKANDMN

Click here to download the sequence:
Link to NCBI Protein BLAST