Transcript Information: R_Transcript_237772.p1


Annotated TAIR IDAT3G48450.1
Annotated Gene NameRPM1-interacting protein 4 (RIN4) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17944232-17944788 | Reverse length=89
E-Value6.1E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.88320778813155
Replicate 21.6932500335724
Replicate 30.73892701923072
Condition 2: 8 Hour
Replicate 10.19746665280036
Replicate 20
Replicate 30.87830373969614
Condition 3: 24 Hour
Replicate 10.18514360667503
Replicate 20.17786499105304
Replicate 30.35302749494996


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_237772.p1 GENE.R_Transcript_237772~~R_Transcript_237772.p1 ORF type:5prime_partial len:124 (+),score=23.19,AvrRpt-cleavage|PF05627.7|1.1e-20,AvrRpt-cleavage|PF05627.7|3.5e+03 R_Transcript_237772:2-373(+)
TATTTACAGTTCTTTTGTCTTCCTTCTTTCTCTTGTCGGATTGTGTTAATTGTTCCTGCGATTATATCTTTGATGTCATCGGCGGCTAATGCAAGGGGCCAACCATTGCCAAAATTTGGAGAATGGGATGTAAACAATCCAGCCTCAGCTGCAGGGTTTACAGTCATATTTAACAAGGCAAGAGATCAGAAGAAGACCAATGGAACTGCCGTTGGTAGAATGCCACCTCCTCAAAGGCTTGATGAGGATAATAACAATGCCAATCACCAACATAACCACCGCAACCACCATAAGCGAGATGACAAGCATAATCACCACAACCCCCAAGATAACGCCCAGAAGAAGTGGTTGTGCTGTATATTTGGTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_237772.p1 GENE.R_Transcript_237772~~R_Transcript_237772.p1 ORF type:5prime_partial len:124 (+),score=23.19,AvrRpt-cleavage|PF05627.7|1.1e-20,AvrRpt-cleavage|PF05627.7|3.5e+03 R_Transcript_237772:2-373(+)
YLQFFCLPSFSCRIVLIVPAIISLMSSAANARGQPLPKFGEWDVNNPASAAGFTVIFNKARDQKKTNGTAVGRMPPPQRLDEDNNNANHQHNHRNHHKRDDKHNHHNPQDNAQKKWLCCIFGG*

Click here to download the sequence:
Link to NCBI Protein BLAST