Transcript Information: R_Transcript_237908.p1


Annotated TAIR IDAT1G50700.1
Annotated Gene Namecalcium-dependent protein kinase 33
Annotated Gene Symbol(s)CPK33
Annotation TypeOrtholog
Chromosome Positionchr1:18782214-18784385 | Forward length=521
E-Value4.9E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7526016958214
Replicate 28.1276001611476
Replicate 37.5124246955124
Condition 2: 8 Hour
Replicate 16.1872884544114
Replicate 27.0929678958599
Replicate 38.5878587881401
Condition 3: 24 Hour
Replicate 17.6526024092347
Replicate 27.5889062849298
Replicate 38.472659878799


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_237908.p1 GENE.R_Transcript_237908~~R_Transcript_237908.p1 ORF type:5prime_partial len:186 (-),score=35.64,EF-hand_1|PF00036.28|2.3e-05,EF-hand_1|PF00036.28|2.4e-06,EF-hand_1|PF00036.28|1.6e-07,EF-hand_1|PF00036.28|3.1e-09,EF-hand_7|PF13499.2|1.2e-13,EF-hand_7|PF13499.2|5.8e-12,EF-hand_6|PF13405.2|0.00053,EF-hand_6|PF13405.2|8.9e+02,EF-hand_6|PF13405.2|0.016,EF-hand_6|PF13405.2|2.2e-07,EF-hand_6|PF13405.2|0.00036,EF-hand_5|PF13202.2|0.0005,EF-hand_5|PF13202.2|0.00066,EF-hand_5|PF13202.2|0.0002,EF-hand_5|PF13202.2|0.0008,EF-hand_8|PF13833.2|0.026,EF-hand_8|PF13833.2|7.1e-08,EF-hand_8|PF13833.2|27,EF-hand_8|PF13833.2|5.9e-10,EF-hand_4|PF12763.3|0.0025,EF-hand_4|PF12763.3|0.0013,SPARC_Ca_bdg|PF10591.5|0.031,SPARC_Ca_bdg|PF10591.5|0.00042,EF-hand_9|PF14658.2|0.0046,EF-hand_9|PF14658.2|0.013,Toprim_2|PF13155.2|0.035,Toprim_2|PF13155.2|14,Toprim_2|PF13155.2|34 R_Transcript_237908:38-595(-)
GGTTTGTTGGCAGTGCTGGCGAGAGTGCAAGGGAAGGAGGTACGTCTAGTCCGGCAGGTTTGGCGCAAATTTGTTAACTTGTACTCGTGCAAATTTCTGAAGGTCATTTCAGAGGAAATAAAGGGTTCCAAAACCATGTTTATTAACATGGACACAGACAAGAGTGGCTCAATCACTTATGAAGAGCTAAAAAGAGGATTGGCTGAGCTCGGTTCAAAGCTTACCGAGGCCGAAGTCAAGCAACTTATGGAGGCTGCTGATGTGGACGGAAATGGAACCATTGATTACAGTGAATTTATCACTGCAACTATGAATAGACATAGACTGGAAACCGATGAAAATCTTTTGAAAGCATTCCAACATTTTGACAAGGATAATAGTGGGTTTATAACAACAGATGAACTGGAAATTGCCATGAAGGAATATGGAATCGGTGATGAAAGCAGCATCAAGGAAATTCTCTCTGAAGTTGATACTGATAATGATGGACGAATCAACTATGATGAATTTTGCACAATGATGAGAAGCGGTACAAAGCAACAAGTAAAACTCTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_237908.p1 GENE.R_Transcript_237908~~R_Transcript_237908.p1 ORF type:5prime_partial len:186 (-),score=35.64,EF-hand_1|PF00036.28|2.3e-05,EF-hand_1|PF00036.28|2.4e-06,EF-hand_1|PF00036.28|1.6e-07,EF-hand_1|PF00036.28|3.1e-09,EF-hand_7|PF13499.2|1.2e-13,EF-hand_7|PF13499.2|5.8e-12,EF-hand_6|PF13405.2|0.00053,EF-hand_6|PF13405.2|8.9e+02,EF-hand_6|PF13405.2|0.016,EF-hand_6|PF13405.2|2.2e-07,EF-hand_6|PF13405.2|0.00036,EF-hand_5|PF13202.2|0.0005,EF-hand_5|PF13202.2|0.00066,EF-hand_5|PF13202.2|0.0002,EF-hand_5|PF13202.2|0.0008,EF-hand_8|PF13833.2|0.026,EF-hand_8|PF13833.2|7.1e-08,EF-hand_8|PF13833.2|27,EF-hand_8|PF13833.2|5.9e-10,EF-hand_4|PF12763.3|0.0025,EF-hand_4|PF12763.3|0.0013,SPARC_Ca_bdg|PF10591.5|0.031,SPARC_Ca_bdg|PF10591.5|0.00042,EF-hand_9|PF14658.2|0.0046,EF-hand_9|PF14658.2|0.013,Toprim_2|PF13155.2|0.035,Toprim_2|PF13155.2|14,Toprim_2|PF13155.2|34 R_Transcript_237908:38-595(-)
GLLAVLARVQGKEVRLVRQVWRKFVNLYSCKFLKVISEEIKGSKTMFINMDTDKSGSITYEELKRGLAELGSKLTEAEVKQLMEAADVDGNGTIDYSEFITATMNRHRLETDENLLKAFQHFDKDNSGFITTDELEIAMKEYGIGDESSIKEILSEVDTDNDGRINYDEFCTMMRSGTKQQVKLF*

Click here to download the sequence:
Link to NCBI Protein BLAST