Transcript Information: R_Transcript_237993.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.18393029148653


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_237993.p1 GENE.R_Transcript_237993~~R_Transcript_237993.p1 ORF type:5prime_partial len:119 (-),score=26.67,RVT_1|PF00078.23|1.1e-20 R_Transcript_237993:14-370(-)
GCTTTTGTAGCAGGGAGGCAAATTCTTGATGCCACTCAAGTGGCTAATGAGGTTGTGGATGACGCGAGGAGGTCAGGAACACAGGTGGTGGTCTTCAAACTGGATTTTGAGAAGGCTTATGATCGAGTCAACTGGGCTTTTCGTGACAGGGTGCTTGATCGGAAAGGTTTTGGTGTGAGGTGGAGACGATGGATGATGGGGTGCTTCTCTAATGCCTTTTTTTCGATGTTGGTGAATGGTGCTCCAAGGGAGTGGTTTTCCTCCACTCGTGGGTTGCGACAGGGGGCTCCTTTGTCTCCCTTCCTTTTTGCTCTTGTAGTGGATGTCTTGAGTAGGATGTTAGATAGGGGGTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_237993.p1 GENE.R_Transcript_237993~~R_Transcript_237993.p1 ORF type:5prime_partial len:119 (-),score=26.67,RVT_1|PF00078.23|1.1e-20 R_Transcript_237993:14-370(-)
AFVAGRQILDATQVANEVVDDARRSGTQVVVFKLDFEKAYDRVNWAFRDRVLDRKGFGVRWRRWMMGCFSNAFFSMLVNGAPREWFSSTRGLRQGAPLSPFLFALVVDVLSRMLDRGW*

Click here to download the sequence:
Link to NCBI Protein BLAST