Transcript Information: R_Transcript_238167.p1


Annotated TAIR IDAT5G47020.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19082005-19089800 | Forward length=1421
E-Value4.7E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.77672174275399
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.52097584994139
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.70389124118864
Replicate 30.46569584440207


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_238167.p1 GENE.R_Transcript_238167~~R_Transcript_238167.p1 ORF type:internal len:94 (+),score=14.08 R_Transcript_238167:1-279(+)
ACATCTGTGTGGAATCATTTGGTGGCTGGTTTGAATGCCCAGCTAAGAACTGTAAGGCATGGATTCATCCGTTCAACACTTGCTCCTGTAGTTAGTTGGATCCGAAGTCATGCAAATCCCCAACTTGAGTTTCACAGGGTCAGGATTCATCTTGGTTGGTTTCATGCTACTACTGCTGGCTATTATCAACTTGGTATTTGGGTAGTGGTTGATGATTACACGTTTCATAGTACACACCAAACTGTTTCGACAAGCATCACTGTTGACAAGTCTCCCAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_238167.p1 GENE.R_Transcript_238167~~R_Transcript_238167.p1 ORF type:internal len:94 (+),score=14.08 R_Transcript_238167:1-279(+)
TSVWNHLVAGLNAQLRTVRHGFIRSTLAPVVSWIRSHANPQLEFHRVRIHLGWFHATTAGYYQLGIWVVVDDYTFHSTHQTVSTSITVDKSPR

Click here to download the sequence:
Link to NCBI Protein BLAST