Transcript Information: R_Transcript_238170.p1


Annotated TAIR IDAT5G47020.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19082005-19089800 | Forward length=1421
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.27951102301482
Replicate 30.22689513275484
Condition 3: 24 Hour
Replicate 10.5739451806926
Replicate 20
Replicate 30.27359630858622


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_238170.p1 GENE.R_Transcript_238170~~R_Transcript_238170.p1 ORF type:internal len:80 (-),score=9.19 R_Transcript_238170:3-239(-)
GTAGTTAGTTGGATCCGAAGTCATGCAAATCCCCAACTTGAGTTTCACAGGGTCAGGATTCATCTTGGTTGGTTTCATGCTACTACTGCTGGCTATTATCAACTTGGTATTTGGGTAGTGGTTGATGATTACACGTTTCATAGTACACACCAAACTGTTTCGACAAGCATCACTGTTGACAAGTCTCCCAGGAGAAATGACAGAACGGGAGAAAAGCACTATAGGCAGCTACAACAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_238170.p1 GENE.R_Transcript_238170~~R_Transcript_238170.p1 ORF type:internal len:80 (-),score=9.19 R_Transcript_238170:3-239(-)
VVSWIRSHANPQLEFHRVRIHLGWFHATTAGYYQLGIWVVVDDYTFHSTHQTVSTSITVDKSPRRNDRTGEKHYRQLQQ

Click here to download the sequence:
Link to NCBI Protein BLAST