Transcript Information: R_Transcript_23823.p1


Annotated TAIR IDAT5G01720.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:267118-270391 | Reverse length=665
E-Value2.4E-300
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8966283764481
Replicate 27.7764075615919
Replicate 39.1966309460108
Condition 2: 8 Hour
Replicate 113.748359725935
Replicate 216.629870643371
Replicate 318.070936795408
Condition 3: 24 Hour
Replicate 18.5028915658163
Replicate 26.3061703198243
Replicate 38.5605244997643


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23823.p1 GENE.R_Transcript_23823~~R_Transcript_23823.p1 ORF type:complete len:675 (+),score=86.17,LRR_4|PF12799.3|1.1e+02,LRR_4|PF12799.3|0.066,LRR_4|PF12799.3|0.063,LRR_4|PF12799.3|36,LRR_4|PF12799.3|4,LRR_4|PF12799.3|5.7,LRR_4|PF12799.3|21,LRR_4|PF12799.3|0.054,LRR_4|PF12799.3|0.33,LRR_4|PF12799.3|18,LRR_4|PF12799.3|2.8,LRR_4|PF12799.3|0.72,LRR_4|PF12799.3|2.4,LRR_8|PF13855.2|0.0012,LRR_8|PF13855.2|8.1e+02,LRR_8|PF13855.2|0.44,LRR_8|PF13855.2|4.6e+03,LRR_8|PF13855.2|5,LRR_8|PF13855.2|33,LRR_8|PF13855.2|1.1e+03,LRR_8|PF13855.2|1.5e+03,LRR_8|PF13855.2|0.086,LRR_8|PF13855.2|3.8e+03,LRR_1|PF00560.29|7e+03,LRR_1|PF00560.29|4.4e+02,LRR_1|PF00560.29|6.4e+02,LRR_1|PF00560.29|1.9e+02,LRR_1|PF00560.29|1.7e+03,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|41,LRR_1|PF00560.29|6.1e+02,LRR_1|PF00560.29|3.4e+02,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|2.6e+02,LRR_1|PF00560.29|6.7e+03,LRR_1|PF00560.29|5.7e+02,LRR_1|PF00560.29|6.1e+02,LRR_6|PF13516.2|7.1e+02,LRR_6|PF13516.2|56,LRR_6|PF13516.2|2.7e+03,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|4.5e+03,LRR_6|PF13516.2|1.3e+02,LRR_6|PF13516.2|9e+02,LRR_6|PF13516.2|1e+02,LRR_6|PF13516.2|25,LRR_6|PF13516.2|2.1e+03,LRR_6|PF13516.2|1.6e+03,LRR_6|PF13516.2|6.4,LRR_6|PF13516.2|2e+03,LRR_6|PF13516.2|1.4e+02,LRR_6|PF13516.2|7.7,LRR_6|PF13516.2|2.7e+03 R_Transcript_23823:106-2130(+)
ATGAAGAAACAAAAAACAACAATGAAAGTTCAAACAAATGATCTGTTTGATCTCTTAAGCGAGGAAATCATATTCACAATCCTAGACTACCTGAAGGATTCAAATTCCCAAGACCTGAAATCATTCTCTTTAGTCTGCAAATCCTTCTACAACCTCGAATCAAAACACCGTCGCACGTTGAAGCCCCTACGGTCAGACCACCTCACCAAGACCCTCACACGGTACACCCAAGTTACGTACCTCGATCTCACCCTCTGCCCACGTGTCACCGAGGCCACGCTGACGTCACTTGCGGGGCTCTGTGGGTCCAGGCTGGAGAAGCTGGATCTGTCGAGGTCGAAGTTCACGGCGGCGGGACTGGGGGTGGTGGTGAGCAGGTGTAAGAGGCTGAAGGAGCTGGACTTATCGAATGCGACGGAGCTGCGAGACTCGAGTGCGGCGGCGATTGCGGAGGCGAGGAATTTGGAGAGGTTGTGGTTGGGGAGGTGTAAGTTGGTTACGGATATTGGGATTGGGTGTATTGCGGTTGGGTGTGGCAAGTTGAAGCTGTTGGGGTTGAAATGGTGTTTGGGGATTGGGGATTTGGGGGTTGAGTTGGTTGCCCTCAAGTGTAAGGATCTTCGCTTCTTGGATGTCTCTTATTTGCCGATTACCAGTAAATGTTTGCCAGCCATCTTGAAGTTACAGAATCTTGAGGAGCTGATTCTAGAAGGATGCTTCGGTGTTGATGATGACAGCCTTGTCGATCTCAAGCAGGGTTCTAAGTCCTTGAAGGTACCACTACAGACTCTTGACTTATCAAGCTGCCAGAACGTGAGCCACGTAGGCTTGTCTTCGTTAACAAGTGGGACTGGATATCTACAACAACTAACATTAGCATATGGCTCTCCGGTCACTCTCGATGTCGCCCACAGTTTGCAGAAGTTGTCTAAACTGCAATCTATCAAGTTAGATGGCTGCCAAGTTACTTGTTCTGGTCTCCAAGCCATCGGCAATTGCTGTTTTTCATTGCAGGAGCTGAGCCTGAGTAAATGCTCAGGTGTGACGGACGAAGGCTTGTCCTCTGTTGTGAAGAAGCAAAAGGAGCTCCGAAAGCTGGATATTACATGTTGTCGCAAGATAACTCACGTCTCCATAGCCCATATTGCCAATTCATGCACCTCTCTCACATCTCTGAAGATGGAATCTTGTACTCTGGTTCCTAGGGAAGCCTTTGTTCTGATTGGTCAGAGGTGCCATCTTATTGAGGAACTTGACCTTACTGATAATGAGATAGATGATGAAGGTTTGAAGTCCATCTCCAAATGCTCAAGACTGGCCATTTTGAAACTAGGAATTTGCTTGAACATAACTGCTGAGGGGTTGACGCATATAGGAAAAGGCTGCTCCAAGCTTGTAGAGCTTGACTTGTACAGGTCCATGGAAATTTCAGATATGGGCATTCTAGCCATCGCCCATGGTTGTCCTGAGCTGGCAATGATTAACATAGCATATTGCAAAGAGATCACAGATGGGTCATTGATATCCTTATCGAAGTGTGCAAGATTAAACACATTAGAATGCCGAGGATGTCCTCTTGTTACATCTTTAGGTATAGCTGCTATTGCTGTTGGATGCAAGCAACTCACCAAGCTAGACATAAAGAAGTGCTACAACATCAACGATTTTGGAGTGATACCACTAGCGCACTTCTCTCAGAATCTTAGACAGATAAATTTGTCCTACACGTCAATTACAGATGTTGGCATGCTCTCCCTGGCCAGTATAAGCTGCCTTCAGAGTATGACTATCTTGCACATGAAAGGTTTGACCCCAAGAGGTCTAGCAGCTTCTCTACTAGCTTGTGGGGGCTTGACAAAAGTGAAGCTTCATTCATCATTCAAATCGTTGCTACCACAACTGCTCTTTGAACACCTAGAAGCCCGTGGCTGTGTATTCCAGTGGAGAGAGAAAGTATTTCAGGATGACTTGGAAGACTCCAAGTGTTGGAAAATGCAATTGGAAGAGATGAACAATGATTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23823.p1 GENE.R_Transcript_23823~~R_Transcript_23823.p1 ORF type:complete len:675 (+),score=86.17,LRR_4|PF12799.3|1.1e+02,LRR_4|PF12799.3|0.066,LRR_4|PF12799.3|0.063,LRR_4|PF12799.3|36,LRR_4|PF12799.3|4,LRR_4|PF12799.3|5.7,LRR_4|PF12799.3|21,LRR_4|PF12799.3|0.054,LRR_4|PF12799.3|0.33,LRR_4|PF12799.3|18,LRR_4|PF12799.3|2.8,LRR_4|PF12799.3|0.72,LRR_4|PF12799.3|2.4,LRR_8|PF13855.2|0.0012,LRR_8|PF13855.2|8.1e+02,LRR_8|PF13855.2|0.44,LRR_8|PF13855.2|4.6e+03,LRR_8|PF13855.2|5,LRR_8|PF13855.2|33,LRR_8|PF13855.2|1.1e+03,LRR_8|PF13855.2|1.5e+03,LRR_8|PF13855.2|0.086,LRR_8|PF13855.2|3.8e+03,LRR_1|PF00560.29|7e+03,LRR_1|PF00560.29|4.4e+02,LRR_1|PF00560.29|6.4e+02,LRR_1|PF00560.29|1.9e+02,LRR_1|PF00560.29|1.7e+03,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|41,LRR_1|PF00560.29|6.1e+02,LRR_1|PF00560.29|3.4e+02,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|2.6e+02,LRR_1|PF00560.29|6.7e+03,LRR_1|PF00560.29|5.7e+02,LRR_1|PF00560.29|6.1e+02,LRR_6|PF13516.2|7.1e+02,LRR_6|PF13516.2|56,LRR_6|PF13516.2|2.7e+03,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|4.5e+03,LRR_6|PF13516.2|1.3e+02,LRR_6|PF13516.2|9e+02,LRR_6|PF13516.2|1e+02,LRR_6|PF13516.2|25,LRR_6|PF13516.2|2.1e+03,LRR_6|PF13516.2|1.6e+03,LRR_6|PF13516.2|6.4,LRR_6|PF13516.2|2e+03,LRR_6|PF13516.2|1.4e+02,LRR_6|PF13516.2|7.7,LRR_6|PF13516.2|2.7e+03 R_Transcript_23823:106-2130(+)
MKKQKTTMKVQTNDLFDLLSEEIIFTILDYLKDSNSQDLKSFSLVCKSFYNLESKHRRTLKPLRSDHLTKTLTRYTQVTYLDLTLCPRVTEATLTSLAGLCGSRLEKLDLSRSKFTAAGLGVVVSRCKRLKELDLSNATELRDSSAAAIAEARNLERLWLGRCKLVTDIGIGCIAVGCGKLKLLGLKWCLGIGDLGVELVALKCKDLRFLDVSYLPITSKCLPAILKLQNLEELILEGCFGVDDDSLVDLKQGSKSLKVPLQTLDLSSCQNVSHVGLSSLTSGTGYLQQLTLAYGSPVTLDVAHSLQKLSKLQSIKLDGCQVTCSGLQAIGNCCFSLQELSLSKCSGVTDEGLSSVVKKQKELRKLDITCCRKITHVSIAHIANSCTSLTSLKMESCTLVPREAFVLIGQRCHLIEELDLTDNEIDDEGLKSISKCSRLAILKLGICLNITAEGLTHIGKGCSKLVELDLYRSMEISDMGILAIAHGCPELAMINIAYCKEITDGSLISLSKCARLNTLECRGCPLVTSLGIAAIAVGCKQLTKLDIKKCYNINDFGVIPLAHFSQNLRQINLSYTSITDVGMLSLASISCLQSMTILHMKGLTPRGLAASLLACGGLTKVKLHSSFKSLLPQLLFEHLEARGCVFQWREKVFQDDLEDSKCWKMQLEEMNNDS*

Click here to download the sequence:
Link to NCBI Protein BLAST