Transcript Information: R_Transcript_238404.p4


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value5E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2250309365583
Replicate 21.1273181431569
Replicate 31.0761554575374
Condition 2: 8 Hour
Replicate 11.3146773126038
Replicate 20.60029212996471
Replicate 31.3400517907668
Condition 3: 24 Hour
Replicate 10.30815848627791
Replicate 20.7401093587442
Replicate 31.4689734689193


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_238404.p4 GENE.R_Transcript_238404~~R_Transcript_238404.p4 ORF type:complete len:149 (+),score=16.32,zf-RVT|PF13966.2|1.1e-06,zf-RVT|PF13966.2|1.8e+03 R_Transcript_238404:2535-2981(+)
ATGTTGGGAAATGCAAAAACTCGAGACTCTCTTCACAAAATTGGCATATATATTGATGCTTTCTGCCCTTTTTGTGCTGGAGATACAGAATCCCTTTCTCATTTATTCTTTAAGTGCCCTTTTAGTGCATGCATGATCAAGTCATTCTGTGATTGGTTTGGTATTTTGAAGTATGATTGGACAATATTCTCTTTTCCTCGATGGTCCCTCAGACAATCTGGTATTTCTAAGATCGGTAAGAAGGTGCTAAGTGTATGCTTTATTGGACTCCTGTATCATATCTGGAAGGCTCGTAATATTGCTGTGTGGGAGAAGAGAGTTCTAGTACCTGCTCAGGTGTTCAAAAGATTACAAAGGCAGATGCAAATCCGCTCCACCTCATGTCTGCCTATGACTGTTTCTAGGAATGGTAGAGCTTGGGTCACTCAAGTGTTTAGCTCCTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_238404.p4 GENE.R_Transcript_238404~~R_Transcript_238404.p4 ORF type:complete len:149 (+),score=16.32,zf-RVT|PF13966.2|1.1e-06,zf-RVT|PF13966.2|1.8e+03 R_Transcript_238404:2535-2981(+)
MLGNAKTRDSLHKIGIYIDAFCPFCAGDTESLSHLFFKCPFSACMIKSFCDWFGILKYDWTIFSFPRWSLRQSGISKIGKKVLSVCFIGLLYHIWKARNIAVWEKRVLVPAQVFKRLQRQMQIRSTSCLPMTVSRNGRAWVTQVFSSC*

Click here to download the sequence:
Link to NCBI Protein BLAST