Transcript Information: R_Transcript_238412.p1


Annotated TAIR IDAT2G39140.1
Annotated Gene Namepseudouridine synthase family protein
Annotated Gene Symbol(s)SVR1
Annotation TypeOrtholog
Chromosome Positionchr2:16330238-16333153 | Forward length=410
E-Value1.7E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0581426640417
Replicate 20.60858841786371
Replicate 30.33198170429206
Condition 2: 8 Hour
Replicate 11.4194704317244
Replicate 20
Replicate 30.6576670514633
Condition 3: 24 Hour
Replicate 11.1645264535792
Replicate 20.63928286639355
Replicate 30.79303277851077


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_238412.p1 GENE.R_Transcript_238412~~R_Transcript_238412.p1 ORF type:3prime_partial len:138 (+),score=27.61 R_Transcript_238412:137-547(+)
ATGGCGGCCATTACAGCAGCCATAACAACTGCTTCAACCCAATTCGCGGCCCATCACCTTATAAAACTCTCATCTCTCTCAATCCAAAGACCCTCCTCCCTTCCAACTCTCTCTCTTCGCTTCAGCGCTTCACTCAATTCCCCTTCCCCTTCTTCTTCTTCTTCTACCCTCATCAATGATTTCCACACCACCATTACTACTTTCTCTTCCAACAATTCCTCACACGCGCTTTCTGAGAAGAAGGTGAAGCAGGAAGGGAATAATAAGAAGACGAACAAGTCAGGTGGCGAAGAACCCAAGCACTCGAAGGCTGCCCGCAGGTTTTATAATGAGAAGTTTAGAGAGTCGCAGGCTCAGCGCCTTGCTAAAGTCCTTGCTGCTGCTGGTGTGGCATCACGGAGAAGCAGTGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_238412.p1 GENE.R_Transcript_238412~~R_Transcript_238412.p1 ORF type:3prime_partial len:138 (+),score=27.61 R_Transcript_238412:137-547(+)
MAAITAAITTASTQFAAHHLIKLSSLSIQRPSSLPTLSLRFSASLNSPSPSSSSSTLINDFHTTITTFSSNNSSHALSEKKVKQEGNNKKTNKSGGEEPKHSKAARRFYNEKFRESQAQRLAKVLAAAGVASRRSSE

Click here to download the sequence:
Link to NCBI Protein BLAST