Transcript Information: R_Transcript_238557.p1


Annotated TAIR IDAT2G37940.1
Annotated Gene NameArabidopsis Inositol phosphorylceramide synthase 2
Annotated Gene Symbol(s)AtIPCS2
Annotation TypeOrtholog
Chromosome Positionchr2:15877169-15879411 | Forward length=305
E-Value3.1E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.23329222684776
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.76526024092347
Replicate 20.24505843211753
Replicate 30.85118851560156


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_238557.p1 GENE.R_Transcript_238557~~R_Transcript_238557.p1 ORF type:3prime_partial len:180 (+),score=15.80 R_Transcript_238557:392-928(+)
ATGTCGTTTTACATAGGTCGTGAAGCTTCAAAGCTTTGGAAGAGGTTTTGTGCAGAACTATCCACTGAAATCCATCTTCTTGCAGAAAATTGGAAGTACATTCTAGGAGGGATAATTTTTCAGTATATCCACGGATTGGCTGCTCGAGGTGTTCATTTGATACATCGACCTGGTCCAACACTTCAGGATGCTGGTTTCTTTTTGCTTCCTGAGCTTGGGCGAGACAAATTTTACTTAAGTGAGACTGTTTTCGCTTCCATTTTTGTATCCTTTTTCTTGTGGACATTTCATCCATTTATTCTCAAAAGTAAAAAGATTTATACGGTGCTGTTGTGGTCCAGGGTCCTGGCTTTCTTAGTTGCATCTCAGAGTCTTAGGATCATCACATTCTACTCTACACAACTTCCTGGTCCAAGTTACCATTGTCGTGAGGTGTATCAAGCAGTTCGGTTGGCTACTTGTTGTGGTGCAGAGCTTATTGATCATAGCTTCTCGCAAACATTATACTGTAGATGTGGTTGTAGCATGGTATACCGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_238557.p1 GENE.R_Transcript_238557~~R_Transcript_238557.p1 ORF type:3prime_partial len:180 (+),score=15.80 R_Transcript_238557:392-928(+)
MSFYIGREASKLWKRFCAELSTEIHLLAENWKYILGGIIFQYIHGLAARGVHLIHRPGPTLQDAGFFLLPELGRDKFYLSETVFASIFVSFFLWTFHPFILKSKKIYTVLLWSRVLAFLVASQSLRIITFYSTQLPGPSYHCREVYQAVRLATCCGAELIDHSFSQTLYCRCGCSMVYR

Click here to download the sequence:
Link to NCBI Protein BLAST