Transcript Information: R_Transcript_238558.p1


Annotated TAIR IDAT3G54020.1
Annotated Gene NameArabidopsis Inositol phosphorylceramide synthase 1
Annotated Gene Symbol(s)AtIPCS1
Annotation TypeOrtholog
Chromosome Positionchr3:20006098-20008020 | Forward length=305
E-Value6.8E-144
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.54370521992779
Replicate 20.53607575530974
Replicate 30.68232835392794
Condition 2: 8 Hour
Replicate 10.20839033997656
Replicate 20.19030537737179
Replicate 31.0041316513406
Condition 3: 24 Hour
Replicate 10.19538559342727
Replicate 20.28155649647545
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_238558.p1 GENE.R_Transcript_238558~~R_Transcript_238558.p1 ORF type:3prime_partial len:235 (+),score=23.15,PAP2_C|PF14360.2|3.1e+02,PAP2_C|PF14360.2|7.5e-22 R_Transcript_238558:392-1093(+)
ATGTCGTTTTACATAGGTCGTGAAGCTTCAAAGCTTTGGAAGAGGTTTTGTGCAGAACTATCCACTGAAATCCATCTTCTTGCAGAAAATTGGAAGTACATTCTAGGAGGGATAATTTTTCAGTATATCCACGGATTGGCTGCTCGAGGTGTTCATTTGATACATCGACCTGGTCCAACACTTCAGGATGCTGGTTTCTTTTTGCTTCCTGAGCTTGGGCGAGACAAATTTTACTTAAGTGAGACTGTTTTCGCTTCCATTTTTGTATCCTTTTTCTTGTGGACATTTCATCCATTTATTCTCAAAAGTAAAAAGATTTATACGGTGCTGTTGTGGTCCAGGGTCCTGGCTTTCTTAGTTGCATCTCAGAGTCTTAGGATCATCACATTCTACTCTACACAACTTCCTGGTCCAAGTTACCATTGTCGTGAGGGTTCAGAACTTGCTACTCTCCCTCCTCCACACAGTGCACTTGAGTTCTTTTTACTCAACTTCCCTCAAGGGGCATTTTATGGCTGTGGTGACCTCATTTTTTCATCCCATATGATATTTACACTAGTTTTCATCCGAACGTATCACAAATATGGCACAAAGAGGTGTATCAAGCAGTTCGGTTGGCTACTTGTTGTGGTGCAGAGCTTATTGATCATAGCTTCTCGCAAACATTATACTGTAGATGTGGTTGTAGCATGGTATACCGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_238558.p1 GENE.R_Transcript_238558~~R_Transcript_238558.p1 ORF type:3prime_partial len:235 (+),score=23.15,PAP2_C|PF14360.2|3.1e+02,PAP2_C|PF14360.2|7.5e-22 R_Transcript_238558:392-1093(+)
MSFYIGREASKLWKRFCAELSTEIHLLAENWKYILGGIIFQYIHGLAARGVHLIHRPGPTLQDAGFFLLPELGRDKFYLSETVFASIFVSFFLWTFHPFILKSKKIYTVLLWSRVLAFLVASQSLRIITFYSTQLPGPSYHCREGSELATLPPPHSALEFFLLNFPQGAFYGCGDLIFSSHMIFTLVFIRTYHKYGTKRCIKQFGWLLVVVQSLLIIASRKHYTVDVVVAWYTV

Click here to download the sequence:
Link to NCBI Protein BLAST