Transcript Information: R_Transcript_238595.p1


Annotated TAIR IDAT5G42220.1
Annotated Gene NameUbiquitin-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16872962-16877455 | Forward length=879
E-Value2.2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2053842139909
Replicate 20
Replicate 30.64830389423073
Condition 2: 8 Hour
Replicate 10.69299617775222
Replicate 20.21095171548288
Replicate 30
Condition 3: 24 Hour
Replicate 10.43316617410762
Replicate 21.4564793606985
Replicate 30.20648778006507


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_238595.p1 GENE.R_Transcript_238595~~R_Transcript_238595.p1 ORF type:5prime_partial len:106 (+),score=8.87,ubiquitin|PF00240.19|2.3e-13 R_Transcript_238595:2-319(+)
AAGAATATGCCTGTGTCATCCTTTAAGGAGAAAATTGCTGATGAAATTGGTGTACCTGTGGTTCAGCAACGACTTATTTTTAGGGGGAAGGTATTGAAGGATGAATACTCACTCTCCGAGTATCGTATCCTTCAAGTAGTTTGTATTTATTTTCCTTTCTTATTGATCAAAAGAAGCTGTTTAAGCAAGCTTTATTACTTTTGTCTTTGTAGTATGCATGCATGTAAGGTTGTATGGATTGTTTGGGGTACTAAGATTTATCTGAGATCTGAATGTGTTCTGTTTTTGACATTTCTACTAAATCTTTGGTTTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_238595.p1 GENE.R_Transcript_238595~~R_Transcript_238595.p1 ORF type:5prime_partial len:106 (+),score=8.87,ubiquitin|PF00240.19|2.3e-13 R_Transcript_238595:2-319(+)
KNMPVSSFKEKIADEIGVPVVQQRLIFRGKVLKDEYSLSEYRILQVVCIYFPFLLIKRSCLSKLYYFCLCSMHACKVVWIVWGTKIYLRSECVLFLTFLLNLWFA*

Click here to download the sequence:
Link to NCBI Protein BLAST