Transcript Information: R_Transcript_238908.p1


Annotated TAIR IDAT4G20820.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11150160-11151758 | Forward length=532
E-Value5E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18344684376602
Replicate 20.10550904731808
Replicate 30
Condition 2: 8 Hour
Replicate 10.61522273736797
Replicate 20.11236624040797
Replicate 30.27364237116161
Condition 3: 24 Hour
Replicate 10.11536586546585
Replicate 20.22166089337264
Replicate 30.1099884657633


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_238908.p1 GENE.R_Transcript_238908~~R_Transcript_238908.p1 ORF type:internal len:199 (+),score=20.10,FAD_binding_4|PF01565.19|8.7e-20 R_Transcript_238908:2-595(+)
TCTCAATTGAGCAAGATGACTACTCATGAAATGATGAAGTTAAAGGTCAATTTGCAGGAAGACCAACATAAAGAAGATCATCAGAAACAGAAACAAAATCACAACATTATTCAAGATCATTCTGCTACCTTATCAACCCCTGTCTCTTTGCTCATCCACACCCCACAAAGCCCTTCATATTCAACCATCTTAGAATCTCGCATTCACAATCTTCGATTTCTTAATCCAACTACACCAAAACCAGCCCTTATTCTCACCCCATTCCATGCGTCCCAAGTACAAGAAGCCGTAAAATGGGCAAAGAATCAAACCCTTCAGATGAAAATCCGAAGTGGGGGGCACGATTACGAAGGTTTATCCTACAAATCTGACGTGCCCTTCTTCATCCTGGACATGTTCAATCTTCGAGCCATCGATATTAACCTCGAGGAAGAAACAGCTTGGGTGCAAGTAGGAGCGACAATCGGAGAGTTGGTTTATAGTATTGCGAAACAGAGCAATACTCATGGCTTCCCAGCAGGGGTGTGCCCTTCAGTAGGGATAGGGGGTCATTTTAGTGGGGGTGGATATGGGAATATGATTAGGAAATTTGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_238908.p1 GENE.R_Transcript_238908~~R_Transcript_238908.p1 ORF type:internal len:199 (+),score=20.10,FAD_binding_4|PF01565.19|8.7e-20 R_Transcript_238908:2-595(+)
SQLSKMTTHEMMKLKVNLQEDQHKEDHQKQKQNHNIIQDHSATLSTPVSLLIHTPQSPSYSTILESRIHNLRFLNPTTPKPALILTPFHASQVQEAVKWAKNQTLQMKIRSGGHDYEGLSYKSDVPFFILDMFNLRAIDINLEEETAWVQVGATIGELVYSIAKQSNTHGFPAGVCPSVGIGGHFSGGGYGNMIRKFG

Click here to download the sequence:
Link to NCBI Protein BLAST