Transcript Information: R_Transcript_238909.p1


Annotated TAIR IDAT1G26380.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9126901-9128508 | Reverse length=535
E-Value4.1E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34224301790098
Replicate 20.13122687760186
Replicate 30
Condition 2: 8 Hour
Replicate 10.15303665592028
Replicate 20
Replicate 30.11344756637742
Condition 3: 24 Hour
Replicate 10
Replicate 20.13784536806611
Replicate 30.13679815429311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_238909.p1 GENE.R_Transcript_238909~~R_Transcript_238909.p1 ORF type:5prime_partial len:160 (+),score=32.90 R_Transcript_238909:2-481(+)
AATATGATTAGGAAATTTGGACTTACAATTGATAATGTTATTGATGCCCAAATTGTTGATTCTAATGGTAAGCTCTTAAATAGAGAGACAATGGGGGAAGATCTCTTTTGGGCTATTAGAGGAGGAGGAGGGTCTAGCTTTGGTGCCATTGTTTCCTACAAGATCAAGCTGGTTCAAGTGCCGGAAATCGTGTCGGTTTTTCGAGTGTCAAGGACCATGGAAGAGAATGCTTTGGATGTTGTCCTTCAATGGCAAGAGATTGCTGCTGTCATTGATGATAACCTCTTCATTAGGCTCATCACCGATGTTGTAGATAGAGGACCTACCAAAAGATGTACTATCAGCAACAACTTTAAGGACGCCGAGAAATACAAGGCTCAAGATGAGAAGCGTGTGAAGGCATCTAAGGCAAAGAACACCTTGGAAAATCATGAGGGGCACCTTGAGAGGGAGTGCCAACGAATTCGGAATCAAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_238909.p1 GENE.R_Transcript_238909~~R_Transcript_238909.p1 ORF type:5prime_partial len:160 (+),score=32.90 R_Transcript_238909:2-481(+)
NMIRKFGLTIDNVIDAQIVDSNGKLLNRETMGEDLFWAIRGGGGSSFGAIVSYKIKLVQVPEIVSVFRVSRTMEENALDVVLQWQEIAAVIDDNLFIRLITDVVDRGPTKRCTISNNFKDAEKYKAQDEKRVKASKAKNTLENHEGHLERECQRIRNQR*

Click here to download the sequence:
Link to NCBI Protein BLAST