Transcript Information: R_Transcript_238910.p1


Annotated TAIR IDAT1G30700.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:10892623-10894437 | Forward length=527
E-Value9E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20980414890481
Replicate 20.24133678639423
Replicate 30.46076771026743
Condition 2: 8 Hour
Replicate 11.6183186603064
Replicate 20.89957570625459
Replicate 30.88671661076603
Condition 3: 24 Hour
Replicate 10.5277656833955
Replicate 20.5070174457604
Replicate 30.1886871093698


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_238910.p1 GENE.R_Transcript_238910~~R_Transcript_238910.p1 ORF type:complete len:348 (+),score=64.27,BBE|PF08031.8|2.4e-18 R_Transcript_238910:92-1045(+)
ATGGGGGAAGATCTCTTTTGGGCTATTAGAGGAGGAGGAGGGTCTAGCTTTGGTGCCATTGTTTCCTACAAGATCAAGCTGGTTCAAGTGCCGGAAATCGTGTCGGTTTTTCGAGTGTCAAGGACCATGGAAGAGAATGCTTTGGATGTTGTCCTTCAATGGCAAGAGATTGCTGCTGTCATTGATGATAACCTCTTCATTAGGCTCATCACCGATGTTGTAGATAGAGCTGGCACTACAGGAGAAAAGACTGTACGAGCAACCTTCAACGCGTTGTTCCTTGGAGACTCTGAAACACTTGTTTCTTTGCTGAGCAAAAAATTCCCAAAACTAGGATTGCAAAAATCAGATTGCCAAGAACTAAGCTGGGTGCAATCAGTTCTATTCTGGGCAGATTTCCCAATAGATGCACCCATGGAATCTCTTCTCCAAGGCAAAGCAGCAACTTTATCATACCACACAAGAAAGTCAGATTATGTGAAGGAACCAATATCAAACGAAGGGTTGGAATTCATATGGAAGAAAATGATAGAGCTAAAATCCATATATCTGATATTCAATCCTTATGGAGGGAGAATGAATGAAATCTCAGAAGATGAAGTTGCTTTCCCACATCGAAAAGGAAACTTGTACAAAGTTCAGTATGTCACAAACTGGTATGAACAAGGGAAAGATAAAGAAAAATATTACTTGGATTTGACAAGGAAGCTTTATGATTATATGACCCCTTTTGTGTCAAAATGTCCAAGACAAGGTTATTATAACTATAGGGATCTTGATTTGGGCATTAATCTTAATATTGATGGTGATAGTGAGAGTAATTATTTGAGTGGGAGGAAATATGGGATCCCTTATTTTTTAAGTAATTTTGACAAGTTGGTGAAAGTTAAAACATTGGTTGATCCTACCAACTTGTTCAATAATGAGCAGAGTATCCCCACTTTGCCCATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_238910.p1 GENE.R_Transcript_238910~~R_Transcript_238910.p1 ORF type:complete len:348 (+),score=64.27,BBE|PF08031.8|2.4e-18 R_Transcript_238910:92-1045(+)
MGEDLFWAIRGGGGSSFGAIVSYKIKLVQVPEIVSVFRVSRTMEENALDVVLQWQEIAAVIDDNLFIRLITDVVDRAGTTGEKTVRATFNALFLGDSETLVSLLSKKFPKLGLQKSDCQELSWVQSVLFWADFPIDAPMESLLQGKAATLSYHTRKSDYVKEPISNEGLEFIWKKMIELKSIYLIFNPYGGRMNEISEDEVAFPHRKGNLYKVQYVTNWYEQGKDKEKYYLDLTRKLYDYMTPFVSKCPRQGYYNYRDLDLGINLNIDGDSESNYLSGRKYGIPYFLSNFDKLVKVKTLVDPTNLFNNEQSIPTLPM*

Click here to download the sequence:
Link to NCBI Protein BLAST