Transcript Information: R_Transcript_238963.p1


Annotated TAIR IDAT1G30680.1
Annotated Gene Nametoprim domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10881665-10886060 | Forward length=709
E-Value3.6E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16153062791786
Replicate 20
Replicate 30.8108579680054
Condition 2: 8 Hour
Replicate 10
Replicate 20.39576782019798
Replicate 30.16063372230431
Condition 3: 24 Hour
Replicate 10
Replicate 20.390358564435
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_238963.p1 GENE.R_Transcript_238963~~R_Transcript_238963.p1 ORF type:3prime_partial len:113 (+),score=16.33,AAA_25|PF13481.2|2.2e-07 R_Transcript_238963:309-644(+)
ATGACGTTGGCGGAGTTGGATCAAGGAAAGGATTGGTTGGATAGTACATTTCATCTTATACGGTGTGAGAATGATTGCCTTCCTAACATCAAATGGGTTCTTGACCTGGCAAAAGCTGCAGTTTTAAGACATGGAGTGCGTGGTCTTGTGATTGATCCTTACAATGAGCTTGACCATCAACGTCCCACCAGCATCAGGACAGAAACAGAGTATGTTAGCCAGATGCTCACAATGATTAAGCGATTCGCTCAACATTATTCTTGCCATGTTTGGTTTGTAGCTCATCCAAGACAGCTGCAAAATTGGGCCGGGGATCCTCCTAATCTCTATGACATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_238963.p1 GENE.R_Transcript_238963~~R_Transcript_238963.p1 ORF type:3prime_partial len:113 (+),score=16.33,AAA_25|PF13481.2|2.2e-07 R_Transcript_238963:309-644(+)
MTLAELDQGKDWLDSTFHLIRCENDCLPNIKWVLDLAKAAVLRHGVRGLVIDPYNELDHQRPTSIRTETEYVSQMLTMIKRFAQHYSCHVWFVAHPRQLQNWAGDPPNLYDI

Click here to download the sequence:
Link to NCBI Protein BLAST