Transcript Information: R_Transcript_239026.p1


Annotated TAIR IDAT3G55480.2
Annotated Gene Nameprotein affected trafficking 2
Annotated Gene Symbol(s)PAT2
Annotation TypeOrtholog
Chromosome Positionchr3:20566372-20571171 | Reverse length=1115
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41017889785885
Replicate 20.70774046347072
Replicate 30.51475814822815
Condition 2: 8 Hour
Replicate 10.27512207805894
Replicate 20
Replicate 31.2237040867677
Condition 3: 24 Hour
Replicate 10
Replicate 21.7346832835285
Replicate 30.98371706457966


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_239026.p1 GENE.R_Transcript_239026~~R_Transcript_239026.p1 ORF type:5prime_partial len:89 (+),score=9.69,Adaptin_N|PF01602.16|8.9e-11 R_Transcript_239026:2-268(+)
CTTGCTCTCATCGCTCAAGGCTTTGATGTCTCCAATTTCTTCCCTCAGGTTGTGAAAAATGTCGCATCGCAATCACTGGAAGTCAAGAAGCTGGTATATTTGTACCTGTTGCATTACGCGGAAAACTATGCTATTAAAGTAACAAATGAATATGTTGCTCCTTTCATTATTTGTACTGATTTTGTCCTCAAGCATCCTGGGCTATACAGTTCTAAGTCAGAAACCTGGGCTATATCCAAGCATCCTGGGCTATACAGTTCTAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_239026.p1 GENE.R_Transcript_239026~~R_Transcript_239026.p1 ORF type:5prime_partial len:89 (+),score=9.69,Adaptin_N|PF01602.16|8.9e-11 R_Transcript_239026:2-268(+)
LALIAQGFDVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAENYAIKVTNEYVAPFIICTDFVLKHPGLYSSKSETWAISKHPGLYSSK*

Click here to download the sequence:
Link to NCBI Protein BLAST