Transcript Information: R_Transcript_239505.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value1E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3842728622046
Replicate 20.44202737718522
Replicate 30.080374517881237
Condition 2: 8 Hour
Replicate 10.25774594681311
Replicate 20.078459234530476
Replicate 30.57320875643327
Condition 3: 24 Hour
Replicate 10.24166112871268
Replicate 20.15477374660054
Replicate 30.69119067432307


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_239505.p1 GENE.R_Transcript_239505~~R_Transcript_239505.p1 ORF type:complete len:285 (+),score=48.58,RVT_1|PF00078.23|3.8e-08 R_Transcript_239505:1079-1933(+)
ATGGAGTACCTCTCCAGATGCCTCAAGGAAGTGATTGGAAACCCAGATTTCAATTATCATCCTAAATGTAGTCGACATGGGATAACTCATTTGATTTTTGCTGATGATCTTATGTTGTTTGCAAGAGGAGATTTGGTGTCCATTCAACTTATTCAAGCTGCTTTTGACAAATTCTCACAAGCCTCTGGACTGAAAGTAAATGTAGATAAGAGCTCCTTTTATTGTGGAGGTGTAGCTGATACAGAGAAAGGTATGATAATGGAGTATTTGAAAATGAAAGCAGGGTTACTGCCAGTAAGATATCTAGGCATGCCTCTCTCATCGATAAAGATCACAGTGGAGCAATGTATGCCTCTAGTGGACAAAATTACAGCAAAGGTGACTAATTGGACAGCAAGGTTTTTATCCTATGTAGGGAGAATACAACTAGTCCAAGCTGTACTTTTTGGTGTGCAAGCCTTCTGGGATCAAATAATCATCATCCCTAAGAAGGTTATAAATCTTATTGAGAGCATTTGCAGAAGTTACATATGGACTGGGAAGGCTGCAATTAATAGAAGGGCTTTAGTGGCCTGGAACACAGTTACTACACCTAAGAAGGAAGAAGGTTTGGGGCTCATGAATCTGATCAGATGGAACCAAGCAGCAATTGGGAAACTCTATATGGAATTTACTCAGAAAAAAGATAAGATATGGATTAAATGGCTTCATGGCTACTGTCCAGGGTTGAATCAAACAAGGAAGGTTCCTCCACAACTATCTTGGATGCTTAGAAAGATTGTGGATACCAGAGACATGATGGAAGGCCTGCTGAGTACCAGAAAGATGGATAAAGCCAAAATCAACCATATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_239505.p1 GENE.R_Transcript_239505~~R_Transcript_239505.p1 ORF type:complete len:285 (+),score=48.58,RVT_1|PF00078.23|3.8e-08 R_Transcript_239505:1079-1933(+)
MEYLSRCLKEVIGNPDFNYHPKCSRHGITHLIFADDLMLFARGDLVSIQLIQAAFDKFSQASGLKVNVDKSSFYCGGVADTEKGMIMEYLKMKAGLLPVRYLGMPLSSIKITVEQCMPLVDKITAKVTNWTARFLSYVGRIQLVQAVLFGVQAFWDQIIIIPKKVINLIESICRSYIWTGKAAINRRALVAWNTVTTPKKEEGLGLMNLIRWNQAAIGKLYMEFTQKKDKIWIKWLHGYCPGLNQTRKVPPQLSWMLRKIVDTRDMMEGLLSTRKMDKAKINHI*

Click here to download the sequence:
Link to NCBI Protein BLAST