Transcript Information: R_Transcript_23955.p1


Annotated TAIR IDAT5G20280.1
Annotated Gene Namesucrose phosphate synthase 1F
Annotated Gene Symbol(s)ATSPS1F, SPS1F
Annotation TypeOrtholog
Chromosome Positionchr5:6844994-6849997 | Reverse length=1043
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9762132376686
Replicate 22.0580728023516
Replicate 32.3532840697273
Condition 2: 8 Hour
Replicate 11.5231546527033
Replicate 22.1496794983986
Replicate 31.9332064091458
Condition 3: 24 Hour
Replicate 11.9690484992659
Replicate 22.0579365034563
Replicate 32.8055870286692


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23955.p1 GENE.R_Transcript_23955~~R_Transcript_23955.p1 ORF type:complete len:1061 (+),score=194.76,Glycos_transf_1|PF00534.16|8.9e-27,S6PP|PF05116.9|1.7e-12,Sucrose_synth|PF00862.15|2.2e-10,Glyco_trans_1_4|PF13692.2|3.3e-08 R_Transcript_23955:274-3456(+)
ATGGCGGGAAATGATTGGATAAACAGTTACTTGGAAGCGATCCTAGACGTAGGAGGCCAAGGCATCGATGCTAACACCTCCAAAACGACGTCATCATCGGCTGCGCCTTCTTTGCTTCTCCGTGAACGAGGTCACTTCAGTCCTTCTAGGTATTTCGTTGAGGAGGTCATCACTGGCTTCGATGAGACTGATCTTCATCGCTCTTGGGTTCGCGCTTCATCAACACGTAGCCCACAAGAGAGGAATACAAGGTTGGAAAATTTGTGCTGGAGAATATGGAATTTGGCTCGCAAGAAGAAGCAGATTGAGGGAGAGGAAGCTCAGCGTTTGGCTAAACGCCGTATGGAACGAGAAAAAGGGCGCAGAGAGGCAACTGCTGATATGTCAGAAGACTTGTCTGAAGAAGAAAAGAAAGACACAGTTGGTGATTTGTCATTTCAGAGTGATAGCAATAGAGGGAGAGGAATGCGCAGAATAAGTTCAGTGGATATGATGGAGAACTGGGCTAGTCAATTCAAGGAGAGGAAGCTTTACCTTGTGTTGATAAGCCTCCATGGCTTGATACGTGGTGAAAATATGGAGCTTGGTCGTGATTCTGATACAGGAGGTCAGGTCAAGTATGTTGTAGAACTTGCCAGGGCACTGGGGTCAATGCCTGGTGTTTACCGTGTCGATCTTCTGACCAGACAAGTGTCAGCCCCAGAAGTGGATTGGAGTTACGGTGAACCTGCTGAGATGCTTAGTCCAATAGATACCGAGGATGCCACTGACGAGCGTGGAGAGAGCAGCGGTGCTTACATTGTTCGAATACCATTTGGGCCGAGAGACAAATATATTGCCAAGGAATCACTTTGGCCATACATTCCAGAGTTCGTTGATGGTGCACTTAGCCACATAAAACATATGTCTAAGGTTCTTGGTGAACAAATTGGTGGGGGGCAGCCTGTATGGCCTTCAGCAATCCATGGGCATTATGCGGATGCTGGAGATTCTGCTGCTCTTTTATCTGGGGCTTTGAATGTGCCGATGGTTTTTACTGGTCATTCACTTGGAAGAGATAAGCTTGAGCAGCTTTTGAAACAAGGGAGACTTTCAAGAGAGGAAATTAACTCGACATACAAAATTTTCCGGCGTATAGAAGCTGAGGAGTTGTGCATTGACGCCTCTGAAATAATTATTACTAGCACGAGACAGGAAATTGAAGAGCAATGGCAAATGTATAATGGATTTGATTTAGTCTTAGAACGCAAACTAAGAGCTAGGATGAGACGTGGTGTGAGCTGTCATGGTAGATTCATGCCCCGTATGGCTAGAATTCCTCCTGGCATGGAATTTCACCATATAGCTCCGCATGATGCTGACATGGACATGGACACTGATGGGCATAAAGATAGTAATACAAACCCTGACCCATCCATTTGGTCTGAGATCATGCGTTTCTTTTCAAATCGTCGGAAACCAATGATTCTTGCCCTTGCTAGGCCGGATCCAAAGAAGAACCTTACAACTTTAGTCAAAGCTTTTGGTGAATGCCGTCCATTGAGGGAACTCGCTAACCTGACACTTATAATGGGAAACCGTGATGATATCGATCAAATGTCTGCCACAAACTCATCCGTTCTGATCTCAATACTTAAACTGATTGACAAATATGATCTGTATGGTCAAGTGGCATATCCTAAGCACCACAAGCAATCTGATGTTCCTGAAATATATCGTCTGGCTGCGAAGACAAAGGGTGTATTCATCAACCCAGCATTTATTGAACCATTTGGGCTGACATTAATTGAGGCAGCAGCTTATGGTTTGCCTATTGTTGCAACGAAGAATGGAGGTCCTGTTGATATTATTGGGGTCCTAGACAATGGTCTTCTCATTGATCCACATGATCAACAATCTGTAGCTGATGCACTTCTGAAGCTTGTGGCAGATAAACAGCTATGGACAAAGTGTAGGCAGAATGGGTTGAAGAATATCCACCTGTTCTCATGGCTAGAGCACTGTAAGAAATACTTGTCTCAGATAGCTAGCTGCAAACCTAGGCAACCAAACTGGCAGAGAATTGACAACGGGTCTGAAGATTCTGAATGTGGTTCGCCTGGTGATTCTTTGAGGGACATTCAGGATATATCTTTAGGCTTCAAGTTTTCAGTGGGGGAAAAGTCTGGAGGAGGCATCACTCTTGGCAATACTAAAAATTCTGAAGATGTTCCAGGTAAAGCGAATAATAAATTGGAAAGTGTCATCTCAAAATGGTCTACCTCTACGGATAAAGCTCATAATGATGCTGGAAATCTAACGTTTCCGGCAATCAGGAGGAGGAGGTATATACTTGTCATTGCTGTGGATTGTGATGCGACATCAGATCATCTACAGATCATTAAGACAGTACTATCTGCTGCTGGAGAGCAAAGGATTGTCGGAACTATTGGATTTATACTTTCAACAGCTATGGCATTGTCTGAGGTGAATTCTCTTTTGCAGTCAGGACACTTGAGTCCCACAGATTTTGATGCCTTCATTTGTAACAGCGGCAGTGAACTGTATTATTCATGTGCTCATAGTGAGGACAAATATGAAGAATCTCCTTTTATACTAGACCAAGACTATAGTTCTCATATTGACTATCGCTGGGGAGGAGAAGGTTTGGGGAGGACTCTGTTGAGATGGGCCGGGTCTGCCAATGAAAGGAGGGGAGAGAATGTTGGACAGATTGTTGTAGCTGATGAATCTAGCTCCACCGATCATTGCTATACATTTAAAGTGAATGATTTGGCTGTGGCACCTTCTCTTAAGGAGCTTAGGAAGCTGATGAGAATCCAGGCTCTTCGTTGTCATGCCATTCATTGCCAAAATGGTACGAGGTTGAATGTTATCCCTGTATTAGCTTCCAGATCTCAAGCACTCAGGTACTTGTATCTCCGGTGGGGCACAGAATTATCAAATTTCGTGGTCTTTGTTGGTGAATCGGGAGACACAGATTACGAAGGATTACTAGGGGGTGTCCACAAGACGATGGTGTTAAAGGGAATTTGCTGTGACGCCCGTAGACTTCATGTCAACAGAAACTATCCTTTAGAACATGTTGTGCCACTTGACAACCCCAGTTTGGTCCAAACTGAAGGGTGTAGTGTCAAGAGCATAAAAGAGTCATTGAGCAAGCTTGGCATATTAAAGTCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23955.p1 GENE.R_Transcript_23955~~R_Transcript_23955.p1 ORF type:complete len:1061 (+),score=194.76,Glycos_transf_1|PF00534.16|8.9e-27,S6PP|PF05116.9|1.7e-12,Sucrose_synth|PF00862.15|2.2e-10,Glyco_trans_1_4|PF13692.2|3.3e-08 R_Transcript_23955:274-3456(+)
MAGNDWINSYLEAILDVGGQGIDANTSKTTSSSAAPSLLLRERGHFSPSRYFVEEVITGFDETDLHRSWVRASSTRSPQERNTRLENLCWRIWNLARKKKQIEGEEAQRLAKRRMEREKGRREATADMSEDLSEEEKKDTVGDLSFQSDSNRGRGMRRISSVDMMENWASQFKERKLYLVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPEVDWSYGEPAEMLSPIDTEDATDERGESSGAYIVRIPFGPRDKYIAKESLWPYIPEFVDGALSHIKHMSKVLGEQIGGGQPVWPSAIHGHYADAGDSAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRLSREEINSTYKIFRRIEAEELCIDASEIIITSTRQEIEEQWQMYNGFDLVLERKLRARMRRGVSCHGRFMPRMARIPPGMEFHHIAPHDADMDMDTDGHKDSNTNPDPSIWSEIMRFFSNRRKPMILALARPDPKKNLTTLVKAFGECRPLRELANLTLIMGNRDDIDQMSATNSSVLISILKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIIGVLDNGLLIDPHDQQSVADALLKLVADKQLWTKCRQNGLKNIHLFSWLEHCKKYLSQIASCKPRQPNWQRIDNGSEDSECGSPGDSLRDIQDISLGFKFSVGEKSGGGITLGNTKNSEDVPGKANNKLESVISKWSTSTDKAHNDAGNLTFPAIRRRRYILVIAVDCDATSDHLQIIKTVLSAAGEQRIVGTIGFILSTAMALSEVNSLLQSGHLSPTDFDAFICNSGSELYYSCAHSEDKYEESPFILDQDYSSHIDYRWGGEGLGRTLLRWAGSANERRGENVGQIVVADESSSTDHCYTFKVNDLAVAPSLKELRKLMRIQALRCHAIHCQNGTRLNVIPVLASRSQALRYLYLRWGTELSNFVVFVGESGDTDYEGLLGGVHKTMVLKGICCDARRLHVNRNYPLEHVVPLDNPSLVQTEGCSVKSIKESLSKLGILKS*

Click here to download the sequence:
Link to NCBI Protein BLAST