Transcript Information: R_Transcript_23964.p2


Annotated TAIR IDAT3G11530.1
Annotated Gene NameVacuolar protein sorting 55 (VPS55) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3628801-3629885 | Reverse length=113
E-Value4.4E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 173.443016124892
Replicate 265.138128850562
Replicate 375.21346124091
Condition 2: 8 Hour
Replicate 152.634969532267
Replicate 260.920197772049
Replicate 358.313835693842
Condition 3: 24 Hour
Replicate 156.038742051876
Replicate 247.583786897781
Replicate 356.528875096869


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_23964.p2 GENE.R_Transcript_23964~~R_Transcript_23964.p2 ORF type:complete len:127 (+),score=20.88,Vps55|PF04133.10|1.9e-33 R_Transcript_23964:165-545(+)
ATGGCCATGACAGTTGAAGTGCTTGCTGGGCTTGCTTTTATGTTCTCCGCTAGCATCTTGCTGCAGATACTGGCATGTGCACTATACAGTAACTGGTGGCCAATGTTGTCAGCTCTTATGTACGTACTTGTGCCAATGCCTTGCATGTTCTTTGGAGGTGGATCCACACAATTTTTAATAACTCGAGATGGTGGAGGTTGGATAGATGCAGCAAAGTTCTTGACAGGAGCTTCAGCAGTTGGAAGCATTGCAATCCCTATGATTCTTAGGCATGCTGATCTAATAGAGACGGGAGCCATGGTCATCGAATTGACTTCCTTCTTCATATTTGTCTGTACCGTCTTGTGCTTCCACCGTGCTAGTCTTGATGATGAATGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_23964.p2 GENE.R_Transcript_23964~~R_Transcript_23964.p2 ORF type:complete len:127 (+),score=20.88,Vps55|PF04133.10|1.9e-33 R_Transcript_23964:165-545(+)
MAMTVEVLAGLAFMFSASILLQILACALYSNWWPMLSALMYVLVPMPCMFFGGGSTQFLITRDGGGWIDAAKFLTGASAVGSIAIPMILRHADLIETGAMVIELTSFFIFVCTVLCFHRASLDDEW*

Click here to download the sequence:
Link to NCBI Protein BLAST