Transcript Information: R_Transcript_239661.p1


Annotated TAIR IDAT1G79740.1
Annotated Gene NamehAT transposon superfamily
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:30004367-30006715 | Reverse length=651
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.064498095246356
Replicate 20.074191874262537
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.19241990056947
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.077341712674549


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_239661.p1 GENE.R_Transcript_239661~~R_Transcript_239661.p1 ORF type:internal len:283 (-),score=46.04,DUF659|PF04937.11|1.5e-41 R_Transcript_239661:1-846(-)
CAATATGTAACTAAGGTCAATAAATCCGCCGAAAAAAGGGGCACTTGGAGATTTATTTGTAATTTTTGTAATGAGTCAAAACAAGGTAGTTATTCTAGGGTGAAAACTCATTTGCTTCAAATACCAAAGCAAGGAATTGCAATTTGTAAGAAGGTTCAACATAATGATTTGCTTGAGATGAGAAGGACAAACAAAGAATTTGAGAAAAGTAAGACAAACCTAGGTCCTAAAGATGTTCCAGTGCCTTGTAGTGGATCACAAATGGAATTGAATCCACTTTTAAAGAAAAGAAAATCTGACTTGCCTCCTTTGGAAAGATCTTTTAATTTGGATGCTAGAAGTCAATTGGATCAAGAAATTGCAAGAATGTTTTTCACTGGTGGTTTACCATTTAACCTTGCTAGAAATCCACATTATGTTAGGTCATATACATTTGCGGCAAATCATAATTTGGGTGGTTATGTGCCTCCGGGGTACAATAAATTGAGGACAACATCAATCCAAGAAAAGGCTAATGTTGAGAGGTTATTAGAACCTCTCAAAGCGACTTGGCCGGAAAAGGGAGTAACTCTTGTTACTGATGGATGGAGTGATCCTCATAGGAGGCCTTTGATTAATTTTATGGCTACTTCGGGAAATGGCCCAATGTTTCTTAGAGCATACAATTGCATGGGTGAATTCAAGAGTAAGGAGTTTATTGCTGATTTGATGAAAGAGGTTATTGATGAAATAGGTCATGAACATATTGTCCAAATCATTACTGACAATGCAAGAAATTGTAAAGGGGCGGGAGAAATCATTGAAGGCATTTACCCACAGATCTATTGGACACCATGTGTGGTTCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_239661.p1 GENE.R_Transcript_239661~~R_Transcript_239661.p1 ORF type:internal len:283 (-),score=46.04,DUF659|PF04937.11|1.5e-41 R_Transcript_239661:1-846(-)
QYVTKVNKSAEKRGTWRFICNFCNESKQGSYSRVKTHLLQIPKQGIAICKKVQHNDLLEMRRTNKEFEKSKTNLGPKDVPVPCSGSQMELNPLLKKRKSDLPPLERSFNLDARSQLDQEIARMFFTGGLPFNLARNPHYVRSYTFAANHNLGGYVPPGYNKLRTTSIQEKANVERLLEPLKATWPEKGVTLVTDGWSDPHRRPLINFMATSGNGPMFLRAYNCMGEFKSKEFIADLMKEVIDEIGHEHIVQIITDNARNCKGAGEIIEGIYPQIYWTPCVVH

Click here to download the sequence:
Link to NCBI Protein BLAST