Transcript Information: R_Transcript_239678.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value8E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6930598129913
Replicate 22.1635532044897
Replicate 32.6286420192306
Condition 2: 8 Hour
Replicate 11.0895349742334
Replicate 20.78551107170441
Replicate 30.72266365467583
Condition 3: 24 Hour
Replicate 10.96777641709291
Replicate 20.67147158214872
Replicate 30.5125926156182


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_239678.p1 GENE.R_Transcript_239678~~R_Transcript_239678.p1 ORF type:5prime_partial len:427 (+),score=48.26,RVT_3|PF13456.2|2e-17,zf-RVT|PF13966.2|4.8e-16,zf-RVT|PF13966.2|3.6e+02,zf-RVT|PF13966.2|1.6e+04 R_Transcript_239678:1-1281(+)
ACTGCTGTAGGGAACGGACAACGTACTCTGTTCTGGGATCATCGGTGGGCACTTGACATCCCCCTATCCTCGGTGGTCACTAAGGACATTCCGTTAGAGCACCAGGACTGTACAGTGGAGGAATATTTGGATACCAATGGCGATTTGAAGTGGGATGAGTTTGCGGACCTACTCCCTCAAGAGGTACTCAAATGTCTAATTCCACTCTCCCTGATACAGGGTGAGGAGGATGTTCTTTACTGGGGCGGTTCTGAGAATGGAAAATTTTCGCTCAAATCTACACTCAAATTGGTTCGAGATGCCCCTGATGTGGAGCATAGTAAGGCATGGGATCTCAGTTGGAGGGTCCCAGTTTCCCAACGCGTCAGAATGTTCCTCTGGTTAGTGATGCATAATCGATTACTCACTAATGCTAATAGGGTCTCACGTTGTTTGGCAGAGGACCTTAGGTGTGCGTGCTGGGGGGCGAATGAAGAGACTATAGATCATGTGCTGAGACAGTGCCCTTATGCTATGGCGGTGTGGGAGCGTCTAAGTGTTGGTTCTGTCCCTGCCAGTTTTTGGTCTCAACCTATTTATGAGTGGCTAGTTGAAAACATTAATATCTATGATCCTGCCTTGGAAGAAGATGCACCGATGAGATTTTCTATTACGTTATGGTGGATATGGAGATGGCGTAATTGCCGAGTCTTCGGGCGGGAGAGTGAAGTGCCTCAAGACCCCCTGATGTTCCTCAAGACTAGATTCTCAGAAACCGTAAAGGCTCTTGGTTTTGATGAATCTTTTTTTGGCTGTACCCTGCCGAGGAGACAAGAAATTTTGATTAGCTGGAAAACACCACCTGATAGATGGATTATACTAAATACTGATGGTGCAAGCAAGGGTAACACAGGACCAGCGGGGGGAGCGGGTATTCTTCGTGACTCCCGAGAGGCTTTTGTAGCTGCTTTCTCTGAAAATTATGTTTCCACTACTGTAACAATGGCTAAACTTTTAGCATTGCAAAGGGGATTGAGCTTGGCCAAGCAACTGGGGATACGCAGGCTTCAGGTCTGTGTTGATTCGCAAGTGGTTGCCAGAAGTATCACTAGCTCTAACTTGAGAACTGGAGTTGGGCTGCACATCATTAAAAGTTGCAGAGAAGCAGTGATACGAGAGGACTGGGATGTTGAGATAAAGCATTGCTATCGGGAGGCCAATCGAGCTGCTGACTGGCTAGCAAACATGGGGTTATCCAGGGAGTGCGTCTGCAAGAGTTTCGTGAAGCACCGCAGGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_239678.p1 GENE.R_Transcript_239678~~R_Transcript_239678.p1 ORF type:5prime_partial len:427 (+),score=48.26,RVT_3|PF13456.2|2e-17,zf-RVT|PF13966.2|4.8e-16,zf-RVT|PF13966.2|3.6e+02,zf-RVT|PF13966.2|1.6e+04 R_Transcript_239678:1-1281(+)
TAVGNGQRTLFWDHRWALDIPLSSVVTKDIPLEHQDCTVEEYLDTNGDLKWDEFADLLPQEVLKCLIPLSLIQGEEDVLYWGGSENGKFSLKSTLKLVRDAPDVEHSKAWDLSWRVPVSQRVRMFLWLVMHNRLLTNANRVSRCLAEDLRCACWGANEETIDHVLRQCPYAMAVWERLSVGSVPASFWSQPIYEWLVENINIYDPALEEDAPMRFSITLWWIWRWRNCRVFGRESEVPQDPLMFLKTRFSETVKALGFDESFFGCTLPRRQEILISWKTPPDRWIILNTDGASKGNTGPAGGAGILRDSREAFVAAFSENYVSTTVTMAKLLALQRGLSLAKQLGIRRLQVCVDSQVVARSITSSNLRTGVGLHIIKSCREAVIREDWDVEIKHCYREANRAADWLANMGLSRECVCKSFVKHRRK*

Click here to download the sequence:
Link to NCBI Protein BLAST