Transcript Information: R_Transcript_239811.p1


Annotated TAIR IDAT1G79160.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29779862-29780668 | Reverse length=239
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28744820401132
Replicate 20.49597560038499
Replicate 30.36073602513626
Condition 2: 8 Hour
Replicate 11.1568125171927
Replicate 20.35213987151473
Replicate 30.28585213575413
Condition 3: 24 Hour
Replicate 10.72308054260485
Replicate 20.52099036749395
Replicate 30.17234413139289


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_239811.p1 GENE.R_Transcript_239811~~R_Transcript_239811.p1 ORF type:5prime_partial len:127 (+),score=23.40 R_Transcript_239811:2-382(+)
AATAGTTCAACCTCGAATTACACAAGTGTATGCACTTTAGACAAGGTGAAGTCAGCCTTAGACAGAGTGGAAAGGGCATCAACTCCGTCATCTTCATCATCGTCGAAGAAGCGTTGGATGGCCCCACCATTAGTGACATCACCTTCAAAGTCCTCATCCTCTATGTCGAACTCCTCATCGTTGTCTTTCAAAGAAGTCGAAGAGGAGGACGAGAGGTGGTCATCGGATCAAAGTGGATTAATGGTTGCCACAGCTTGTCCTGGTTGCTTGCTTTATGTGTTGATTTTAAAGAATGATCCAAAGTGCCCCAAGTGCAATTCACTTGTCAAACTGCCTATGGTGACAAAGAAGCCTAAGATTGATCTTAATATGTCAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_239811.p1 GENE.R_Transcript_239811~~R_Transcript_239811.p1 ORF type:5prime_partial len:127 (+),score=23.40 R_Transcript_239811:2-382(+)
NSSTSNYTSVCTLDKVKSALDRVERASTPSSSSSSKKRWMAPPLVTSPSKSSSSMSNSSSLSFKEVEEEDERWSSDQSGLMVATACPGCLLYVLILKNDPKCPKCNSLVKLPMVTKKPKIDLNMSI*

Click here to download the sequence:
Link to NCBI Protein BLAST