Transcript Information: R_Transcript_239890.p1


Annotated TAIR IDAT5G47400.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19229162-19232586 | Forward length=862
E-Value7E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65189146266853
Replicate 20.24995595733688
Replicate 31.3634962854853
Condition 2: 8 Hour
Replicate 10.29149839222911
Replicate 20.79860292289948
Replicate 30.43218120524731
Condition 3: 24 Hour
Replicate 11.093228915605
Replicate 20.26256260584021
Replicate 30.78170373881776


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_239890.p1 GENE.R_Transcript_239890~~R_Transcript_239890.p1 ORF type:3prime_partial len:84 (-),score=14.71 R_Transcript_239890:1-249(-)
ATGAGCAAACCCTATAAAATGCATACCCACCAATCTGCGCTACTGGCGCTTGTAAAGAATGTTGATACTGTGTTCCACACCAAAAATCCTGGATCAGGCAAGTCGATGCTGAATAGCTTGTCTAAATTTGTCCCACAGATTCGAGAGCAGCTTCAGGATTGGGAAGATGGCTTAAGTGAGAGTGATGCTGACGGATCCCTCCTACATGAGAACTGGAACAGAGACCTGAGACTCTTTGGTGATGGTGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_239890.p1 GENE.R_Transcript_239890~~R_Transcript_239890.p1 ORF type:3prime_partial len:84 (-),score=14.71 R_Transcript_239890:1-249(-)
MSKPYKMHTHQSALLALVKNVDTVFHTKNPGSGKSMLNSLSKFVPQIREQLQDWEDGLSESDADGSLLHENWNRDLRLFGDGE

Click here to download the sequence:
Link to NCBI Protein BLAST