Transcript Information: R_Transcript_240027.p1


Annotated TAIR IDAT3G22220.1
Annotated Gene NamehAT transposon superfamily
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7839808-7842358 | Reverse length=761
E-Value1E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44339176408224
Replicate 20.085005264843312
Replicate 30
Condition 2: 8 Hour
Replicate 10.09913305646658
Replicate 20.72423908797362
Replicate 30.14697660421366
Condition 3: 24 Hour
Replicate 10.46473293983207
Replicate 20.35717018446279
Replicate 30.70891351212623


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_240027.p1 GENE.R_Transcript_240027~~R_Transcript_240027.p1 ORF type:internal len:247 (-),score=35.94,DUF659|PF04937.11|3.9e-29,DUF659|PF04937.11|7.8e+02 R_Transcript_240027:1-738(-)
CCAATGTTTCTTAGAGCATACAATTGCATGGGTGAATTCAAAAGTAAGGAGTTTATTGCTGATTTGATGAAAGAGGTTATTGACGAGATAGGACATGATCATGTTGTCCAAATCATTACTGACAATGCAAGAAATTGTAAAGGGGCGGGAGAAATCATTGAAGGAATTTACCCACAGATCTATTGGACACCATGTGTGGTTCACACCCTTAATCTTGCTTTGAAAAACATTTGTGCCGCAAAAAATGTGGAGGATAATGAAGAAGTGTATGCTCAATGTCATTGGATCACTGAAATCCATGGTGATGCCATTCAAATCAAGAATTATATCATGAACCATACAATGAGATTGTCCATGTATAATAGATTCACCCCACTAAAGTTGCTTTCTGTGGCTGATACTCGCTTTGCTTCTGTTATTGTGATGCTTAAGAGGATTAAGCTAATTAAACGTGCTCTTGAGTCCTTAGTATTGTGTGAAGAGTGGCTTACTTATCGTGAAGATGACCAAGGTCGAGCTAGGTTTGTGAAAGAAAAGGTGCTAAGTGAAACTTGGTGGGACAAAGTGACTTATATTCTTAACTTTACGGCACCTATCTATGACATGATTAGAGCTTGTGACACTGATAAGCCATGCCTTCATTTGGTGTATGAGATGTGGGATTCTATGATCGAGAACGTGAAGAAAGAAATTTATAAGGAAGAAGGCTTATCTCTCTCTAGTGAGTGTCCTTTCTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_240027.p1 GENE.R_Transcript_240027~~R_Transcript_240027.p1 ORF type:internal len:247 (-),score=35.94,DUF659|PF04937.11|3.9e-29,DUF659|PF04937.11|7.8e+02 R_Transcript_240027:1-738(-)
PMFLRAYNCMGEFKSKEFIADLMKEVIDEIGHDHVVQIITDNARNCKGAGEIIEGIYPQIYWTPCVVHTLNLALKNICAAKNVEDNEEVYAQCHWITEIHGDAIQIKNYIMNHTMRLSMYNRFTPLKLLSVADTRFASVIVMLKRIKLIKRALESLVLCEEWLTYREDDQGRARFVKEKVLSETWWDKVTYILNFTAPIYDMIRACDTDKPCLHLVYEMWDSMIENVKKEIYKEEGLSLSSECPFY

Click here to download the sequence:
Link to NCBI Protein BLAST