Transcript Information: R_Transcript_240233.p1


Annotated TAIR IDAT3G49900.2
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18500635-18502614 | Reverse length=520
E-Value1E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.40305110139858
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.10646105935711
Condition 3: 24 Hour
Replicate 10.20197484364549
Replicate 20
Replicate 30.83442862442717


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_240233.p1 GENE.R_Transcript_240233~~R_Transcript_240233.p1 ORF type:5prime_partial len:341 (+),score=59.39,NPH3|PF03000.10|4.9e-08 R_Transcript_240233:2-1024(+)
GCGGAGCACACGGCGTTTCTTGCTAGCAGGTGTCTTGAAGCTCTCTTCTCGTTTGATGGTAGCAATGATGATGATGAGGAGGACGATGAGAATGGTTTAGCTAGTTGTGCTGATGGACTTAAGACAGTTTCACCGGAGAATTTTAGAGTCATTGCTGATTCCATGCAAAGAAGGCTTACAGCAAGTCATGATCTTCTGTATAGAGTGGTTGACCTTTACTTTCTGGTGTGCACTGGGAAGATAACGGAAGAGCAGAGGAGTCAAATATGCAGCTGCATAGACTGCGGCATTCTGTCATCTTCACTCCTGTTGCACGCCGTCCAGAACCCCCGTATGCCCTTACGCTTCATAGTCCAAGCCATGCTCATTGAGCAGCTCAACACTCACCGCTCCATCTTCTCTGCCCTCAACACCGCCACTGCCACCACCATTACAGCACCCAGGCCTCAGCCTCAGCCTCGCGTCAAGGCCTCATCCCCGGCCACATTGGGAGCCATCCTGGAGCAGGATGCTGCCCTCCGCCAGGTGGCCAAGCTGCGAGCCACCATCGACACCACCAGCTCCAGGATCCAAACACTTGAGAGGGAGCTAACCGGGATGAAACAGCTATTGTTGGAGACAGAGAAACACAAACAGAACCACAAAAACAACAGTCTGCTGGTGTTGGACCAGCCTGCAGGGAGGTCTTCGAGTTGTCGTTTCAGCAGTAATGTTAGTAACAAGGTAGAGAGAGGCGAGAGAGGGTCCGTTTCTTCGAGCATGTTGAGGTTTAGGGATCCGAAATTGGAGAATGATCAGACTGTAATAAGTCCTAGGATTGTCAAGAGGAATTTCGGGCAACGGTTGATTAGGGGATTGAAAACCGCATTTGGGGCTTCTTCTAAGGCCAAGGATCATAGGATTGGAAAAGCAGAGCAAATGGGAGTTAATAATGGTGATCAAAATGATGGAGTGAGTAAGATATTGCAAGTAGTCCATAGTGATAGTGTTAATCCTCACCATAGGAGTCATTCTGTTAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_240233.p1 GENE.R_Transcript_240233~~R_Transcript_240233.p1 ORF type:5prime_partial len:341 (+),score=59.39,NPH3|PF03000.10|4.9e-08 R_Transcript_240233:2-1024(+)
AEHTAFLASRCLEALFSFDGSNDDDEEDDENGLASCADGLKTVSPENFRVIADSMQRRLTASHDLLYRVVDLYFLVCTGKITEEQRSQICSCIDCGILSSSLLLHAVQNPRMPLRFIVQAMLIEQLNTHRSIFSALNTATATTITAPRPQPQPRVKASSPATLGAILEQDAALRQVAKLRATIDTTSSRIQTLERELTGMKQLLLETEKHKQNHKNNSLLVLDQPAGRSSSCRFSSNVSNKVERGERGSVSSSMLRFRDPKLENDQTVISPRIVKRNFGQRLIRGLKTAFGASSKAKDHRIGKAEQMGVNNGDQNDGVSKILQVVHSDSVNPHHRSHSVS*

Click here to download the sequence:
Link to NCBI Protein BLAST