Transcript Information: R_Transcript_240236.p1


Annotated TAIR IDAT3G49900.2
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18500635-18502614 | Reverse length=520
E-Value8E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57862412248388
Replicate 20.66558877400368
Replicate 30.46209557110394
Condition 2: 8 Hour
Replicate 11.9052402120335
Replicate 20.57996523507398
Replicate 31.150822575356
Condition 3: 24 Hour
Replicate 11.2570557271653
Replicate 20.9533973583823
Replicate 32.0184626800597


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_240236.p1 GENE.R_Transcript_240236~~R_Transcript_240236.p1 ORF type:5prime_partial len:347 (+),score=61.73,NPH3|PF03000.10|5e-08 R_Transcript_240236:3-1043(+)
CAGATGTCAAAATACATGTTGAAGGCATATGCTTTTACTTGCACAAGGTGTCTTGAAGCGCTGTTCTCCTTGGATGGTAGCGATGATGATGAGGAGGACGAGGATGAGGACGAGAATGGTTTAGCTAGTTGTGCTGATGGACTTAAGACAGTTTCACCGGAGAATTTTAGAGTCATTGCTGATTCCATGCAAAGAAGGCTTACAGCAAGTCATGATCTTCTGTATAGAGTGGTTGACCTTTACTTTCTGGTGTGCACTGGGAAGATAACGGAAGAGCAGAGGAGTCAAATATGCAGCTGCATAGACTGCGGCATTCTGTCATCTTCACTCCTGTTGCACGCCGTCCAGAACCCCCGTATGCCCTTACGCTTCATAGTCCAAGCCATGCTCATTGAGCAGCTCAACACTCACCGCTCCATCTTCTCTGCCCTCAACAACGCCACTGCCACCACCACCAAAGCACCCAGGCCTCAGCCTCGGGACAAGGCCTCATCCCCATCCACACTGGGAGCCATCCTGGAGCGGGATGCTGCCCTCCGCCAGGTGGCCAAGCTGCGAGCCACCATCGACACCACCAGCTCCAGGATCCAAACACTTGAGAGGGAGCTAACCGGGATGAAACAGCTATTGTTGGAGACAGAGAAACACAAACAGAACCACAAAAACAACAGTCTGCTGGTGTTGGACCAGCCTGCAGGGAGGTCTTCGAGTTGTCGTTTCAGCAGTAATGTTAGTAACAAGGTAGAGAGAGGCGAGAGAGGGTCCGTTTCTTCGAGCATGTTGAGGTTTAGGGATCCGAAATTGGAGAATGATCAGACTGTAATAAGTCCTAGGATTGTCAAGAGGAATTTCGGGCAACGGTTGATTAGGGGATTGAAAACCGCATTTGGGGCTTCTTCTAAGGCCAAGGATCATAGGATTGGAAAAGCAGAGCAAATGGGAGTTAATAATGGTGATCAAAATGATGGAGTGAGTAAGATATTGCAAGTAGTCCATAGTGATAGTGTTAATCCTCACCATAGGAGTCATTCTGTTAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_240236.p1 GENE.R_Transcript_240236~~R_Transcript_240236.p1 ORF type:5prime_partial len:347 (+),score=61.73,NPH3|PF03000.10|5e-08 R_Transcript_240236:3-1043(+)
QMSKYMLKAYAFTCTRCLEALFSLDGSDDDEEDEDEDENGLASCADGLKTVSPENFRVIADSMQRRLTASHDLLYRVVDLYFLVCTGKITEEQRSQICSCIDCGILSSSLLLHAVQNPRMPLRFIVQAMLIEQLNTHRSIFSALNNATATTTKAPRPQPRDKASSPSTLGAILERDAALRQVAKLRATIDTTSSRIQTLERELTGMKQLLLETEKHKQNHKNNSLLVLDQPAGRSSSCRFSSNVSNKVERGERGSVSSSMLRFRDPKLENDQTVISPRIVKRNFGQRLIRGLKTAFGASSKAKDHRIGKAEQMGVNNGDQNDGVSKILQVVHSDSVNPHHRSHSVS*

Click here to download the sequence:
Link to NCBI Protein BLAST