Transcript Information: R_Transcript_24029.p1


Annotated TAIR IDAT1G79350.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)EMB1135
Annotation TypeOrtholog
Chromosome Positionchr1:29844829-29853215 | Reverse length=1295
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.605613980165
Replicate 27.1920163366275
Replicate 38.9917492355046
Condition 2: 8 Hour
Replicate 17.6746740879425
Replicate 29.8955245759874
Replicate 312.679035478121
Condition 3: 24 Hour
Replicate 111.033453622867
Replicate 28.7233486656761
Replicate 310.73150893977


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_24029.p1 GENE.R_Transcript_24029~~R_Transcript_24029.p1 ORF type:complete len:1340 (+),score=319.56,AAA_34|PF13872.2|1.4e-133,Helicase_C_4|PF13871.2|2.1e-107,ResIII|PF04851.11|1.8e-06,PHD|PF00628.25|1e+03,PHD|PF00628.25|1.5e+03,PHD|PF00628.25|2.3e-06 R_Transcript_24029:191-4021(+)
ATGGGCCAACCCTCAGCCCCTCCGCCTCCCATTCCCCCGCCTCTCTCTCCTGCAATGTCATCCAATGGCCGTGGCCCTCCTCCTTGCCAAGTTCGCTGCGCCGGTTGCCGCCTCATCCTGGCCGTTGCTCCCGGTATTGCCGAGTTCGTTTGCCCTACTTGCCGCTTGCCTCAAATGCTCCCTCCCGAGCTCTTGAAGAACCTCCGTTCTCCACCCCCACCACCACTTCCACTACCTCCTCCACCTTCTTTTCCTCCTTTTCCTAACCCTAACCCTAACCCTAACCCGGCCCAGGGTTCTGGCCCACCCGTTCAGGCCCACGGTATCGATCCCAGCAAGATGCAACTTCCTTGTGCTAACTGTAAGGCTTTGCTTAATGTCCCTCATGGTCTTACCCGGTTTAAGTGCCCCCAGTGTGAGATCGACCTTGCTGTTGATTTGTCCAAAATTAAGCACCTCCTTCCTTCCCCTCCTGTTGAAGAAGTCAACGAGGTTGCCATTGAAGTTGAACAGGAGGAAGATGAAGGTGGCACAGTGGGGGAGACATTTACTGATTATCGCCCTCCTAAATTATCTTTTGGTCCTCCTCATCCAGATCCAATTGTTGAGACATCATCATTGTCAGCAGTGCAACCACCTGAACCTACATATGAGCTGGCAATAAAGGATGAGATTGAGGAGACAAAGGCATTGTCTTGCTTGCAGCTTGAAACGTTGGTCTATGCTTCTCAGAGACACTTGCAGCATCTTCAGGATGGCTGCAGAGCTGGATTTTTTATTGGAGATGGTGCTGGGGTTGGAAAAGGCCGAACCATTGCAGGGTTAATATGGGAGAATTGGCAGCATGGAAGAAAGAAAGCATTATGGATATCTGTTGGTTCAGACTTAAAGTTTGATGCACGAAGAGATCTGGATGATGTAGGTGCAACTTGTATTGAAGTGCATGCCCTGAATAAGCTTCCTTATGGGAAGCTTGATTCAAAGTCTGTTGGGATCAGGGAAGGTGTTGTGTTTTTGACGTACAGTAGTCTTATTGCATCTTCTGAAAGGGGCCGTTCTCGCTTAAACCAGCTTGTGCAGTGGTTCGGGTCAAAGTTTGATGGTCTTGTTATATTCGATGAGTGTCACAAGGCTAAAAATTTGGTACCTGAAGCTGGAGGGCAGCCTACACGAACAGGCGAAGCTGTTCTGGAACTTCAGGAAAAACTCAAGGAAGCTCGTGTTGTTTATTGCTCAGCCACTGGTGCATCAGAACCACGTAATATGGGCTACATGGTTCGCCTTGGTCTGTGGGGTGATGGTACATCTTTCAGCAATTTCAAGGAGTTTCTAGGTGCACTGGAAAAAGGTGGTGTTGGAGCCTTAGAGCTTGTTGCTATGGACATGAAGGCAAGGGGGATGTTTGTTTGTCGAACACTTAGCTATAAGGGCGCTGAGTTTGAAGTTGTTGAGGCCCCATTGGATGATAAGATGACGGAAATGTATAAGAAAGCAGCTGAATTTTGGGCTGAATTGCGTGTAGAATTATTAAGAGCGGGTGCCCATCTTAAAGAAGATAAAACTACTTCCAGTCAGTTGTGGAGGTTATATTGGGCGAGCCATCAGCGATTTTTTAGACACCTGTGCATGTCAGCAAAGGTGCCTACGGTTGTAAAACTTGCCAAGCAAGCGCTTATGGATAATAAGTGCGTGGTCGTTGGTCTTCAGAGTACTGGAGAGGCACGAACTGAGGAAGCTGTAACAAAATATGGCCTTGAACTAGATGACTTTGTTTCTGGGCCTCGCGAACTGTTGCTCAAGTTTGTTGAAGAAAATTATCCTATGCCTGAAGAGCCTGAACCGCTTCCAGAAGATGAAGGTGTGAAGGAACTCCCACGAAAAAGACACTCTGAAAATCCTGATGTATCATTGAAAGGGCGAGTCAGGAAAGTTGCCAAATGGAAGGAGGAAACTGATGACGATGATGAAAGTTATGAACAGTCTGAATCTGAATGTGATGATGAATCTACTGAATCTGATGACGAATTTCAGATTTGTGACATTTGCAATGGTGAAGAGGATAGGAAAAAGCTGCTTAGATGTGCCTGTTGTGGCCAGCTGGTACATCCTTCATGCTTAGACCCACCTAGAACAGATGTTTGTGAGGATTGGACATGCGATTCATGCAAGCAAAAGACAGAAGAATATCTGCAAGAAAGACGTATCTACATAGAAGAAATCACTAAGAGATTTGAAGCAGCTGTTAAGCGTCGAAAGGAAATTGTGGAAATAATTCGGTCTTTTGATCTACCTAACAATCCATTAGATGACATTATTGATCAGCTCGGAGGGCCTGATAATGTTGCAGAAATAACAGGGAGACGGGGTATGCTTGTTCGAGCTATAGGTGGCAAAGGTGTCACGTATCAGGCGAGGAACACGAAAGATGTCACTATGGAGATGGTTAATATGCACGAGAAGAAACTTTTCATGGATGGTGTGAAGTTGGTCGCTATCATTTCTGAAGCCGGGTCAGCTGGTGTTTCTCTGCAAGCTGACAGAAGGGCTATAAATCAGAGGAGGAGGGTTCACTTGACATTAGAACTCCCATGGAGTGCTGACAGAGCTATCCAGCAATTTGGGAGGACCCATCGGTCTAATCAAGCCTCTGCTCCGGAATACAGACTCCTATTTACGAATCTTGGTGGTGAACGGCGGTTTGCATCTATTGTGGCAAAGAGACTTGAATCTCTTGGTGCACTAACACAGGGTGACCGCAGAGCAGGACCTTCTCTAAGTGCTTATAATTATGATAGTGCCTATGGGAAAAAGGCCTTGATGGTGATGTATAGGGGGATCATGGAGCAGGATTCCTTGCCAGTCGTGCCCCCTGGATGTTCACGTGAAAATCCAGACTCAATTCAGAATTTCATTTCCAAGGCAAAAGCCGCTTTGGTTTCTGTTGGAATTGTGACGGATTCAAGTTTAGGTATGGGAAAAGATTCTGGAAAGCTATCTGGCCGTATAATTGACTCTGACATGCATGATGTTGGTCGTTTTCTTAATCGGTTGTTGGGATTACCTCCTGAAATTCAAAACAGGCTTTTTGAATTATTTATTAGTATCCTGGAAGTGATTATCCAGAAAGCGCGAACTGAAGGGAATCTTGATTCTGGAATTGTTGACATAAAAGCTAATATTATTGAACTTCAAGGAAAACCCAAGACTGTGCATGTGGATCATATGTCTGGTGCACCAACTGTGCTGTTCACATTCACTCTGGACCGTGGGATCACGTGGGAGTTTGCTTCTTCCTTGCTTAATGAGAAACAAAAGGGGGGTCTTGGTTCCACGAATGATGGATTTTATGAGTCCAGGAGGGAATGGCTTGGAAGACGTCATTTCCTTTTGGCTTTTGAAGGCGCCATGTCTGGCATGTTTAAGATAGTTCGTCCTGCTGTTGGAGAGGCGATAAGGGAAATGCCTTTGAGTGAACTTAGAACCAAGTATAGAAAGATATCATCTTTGGAGAAGGCTCACAGTGGGTGGGAAGATGAATACGAGGTTTCATCTCGACAGTGTATGCATGGGCCCAATTGCAAGGTTGGTGCCTATTGTACTGTCGGCAGGAGACTTCAGGAAGTAAATGTTCTGGGTGGCTTGATCCTTCCAATTTGGAAAGCGATTGAGAAGGCCCTATCAAAACAGGCGCGCCACAGCCATAGGCGAATACGTGTTGTGCGTATTGAGACAACCACAGATAGCCAACGAATTGTGGGGCTTTTGATTCCAAGTGCTGCTGTTGAAGATGTGATGCAAGATTTGTCTTGGGTTCAAGATATTGATGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_24029.p1 GENE.R_Transcript_24029~~R_Transcript_24029.p1 ORF type:complete len:1340 (+),score=319.56,AAA_34|PF13872.2|1.4e-133,Helicase_C_4|PF13871.2|2.1e-107,ResIII|PF04851.11|1.8e-06,PHD|PF00628.25|1e+03,PHD|PF00628.25|1.5e+03,PHD|PF00628.25|2.3e-06 R_Transcript_24029:191-4021(+)
MGQPSAPPPPIPPPLSPAMSSNGRGPPPCQVRCAGCRLILAVAPGIAEFVCPTCRLPQMLPPELLKNLRSPPPPPLPLPPPPSFPPFPNPNPNPNPAQGSGPPVQAHGIDPSKMQLPCANCKALLNVPHGLTRFKCPQCEIDLAVDLSKIKHLLPSPPVEEVNEVAIEVEQEEDEGGTVGETFTDYRPPKLSFGPPHPDPIVETSSLSAVQPPEPTYELAIKDEIEETKALSCLQLETLVYASQRHLQHLQDGCRAGFFIGDGAGVGKGRTIAGLIWENWQHGRKKALWISVGSDLKFDARRDLDDVGATCIEVHALNKLPYGKLDSKSVGIREGVVFLTYSSLIASSERGRSRLNQLVQWFGSKFDGLVIFDECHKAKNLVPEAGGQPTRTGEAVLELQEKLKEARVVYCSATGASEPRNMGYMVRLGLWGDGTSFSNFKEFLGALEKGGVGALELVAMDMKARGMFVCRTLSYKGAEFEVVEAPLDDKMTEMYKKAAEFWAELRVELLRAGAHLKEDKTTSSQLWRLYWASHQRFFRHLCMSAKVPTVVKLAKQALMDNKCVVVGLQSTGEARTEEAVTKYGLELDDFVSGPRELLLKFVEENYPMPEEPEPLPEDEGVKELPRKRHSENPDVSLKGRVRKVAKWKEETDDDDESYEQSESECDDESTESDDEFQICDICNGEEDRKKLLRCACCGQLVHPSCLDPPRTDVCEDWTCDSCKQKTEEYLQERRIYIEEITKRFEAAVKRRKEIVEIIRSFDLPNNPLDDIIDQLGGPDNVAEITGRRGMLVRAIGGKGVTYQARNTKDVTMEMVNMHEKKLFMDGVKLVAIISEAGSAGVSLQADRRAINQRRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYRLLFTNLGGERRFASIVAKRLESLGALTQGDRRAGPSLSAYNYDSAYGKKALMVMYRGIMEQDSLPVVPPGCSRENPDSIQNFISKAKAALVSVGIVTDSSLGMGKDSGKLSGRIIDSDMHDVGRFLNRLLGLPPEIQNRLFELFISILEVIIQKARTEGNLDSGIVDIKANIIELQGKPKTVHVDHMSGAPTVLFTFTLDRGITWEFASSLLNEKQKGGLGSTNDGFYESRREWLGRRHFLLAFEGAMSGMFKIVRPAVGEAIREMPLSELRTKYRKISSLEKAHSGWEDEYEVSSRQCMHGPNCKVGAYCTVGRRLQEVNVLGGLILPIWKAIEKALSKQARHSHRRIRVVRIETTTDSQRIVGLLIPSAAVEDVMQDLSWVQDIDD*

Click here to download the sequence:
Link to NCBI Protein BLAST