Transcript Information: R_Transcript_240454.p1


Annotated TAIR IDAT1G27590.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana protein match is: phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G27570.1); Has 109 Blast hits to 109 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:9592293-9593912 | Forward length=264
E-Value3E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.67603559091551
Replicate 20.51842717077279
Replicate 30
Condition 2: 8 Hour
Replicate 10.30229462897834
Replicate 20.27606026964427
Replicate 31.3445637496583
Condition 3: 24 Hour
Replicate 10
Replicate 20.81686144039175
Replicate 31.6213114582887


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_240454.p1 GENE.R_Transcript_240454~~R_Transcript_240454.p1 ORF type:internal len:81 (+),score=22.91 R_Transcript_240454:1-240(+)
CTCTCTCTCCTTGCTACTGCTAACAATCATGGAGATTTGGCTGTCAAGCTCTCTTCATTACGCCAAGTCAAAGACATTCTCTCTTCTTTCTTTTCTTCTGCCGAAAAACATCAACAACTACAACAACAATCTATTGCTTCTGATGTTTTCCCCTTTTTGGTCGAGCTTCAATCTTCTCCTGAATGTCTCGTTCGCAAATTCCTTTTGGAGGTAATAGAGGAGATTGGTTTGAGAGTTCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_240454.p1 GENE.R_Transcript_240454~~R_Transcript_240454.p1 ORF type:internal len:81 (+),score=22.91 R_Transcript_240454:1-240(+)
LSLLATANNHGDLAVKLSSLRQVKDILSSFFSSAEKHQQLQQQSIASDVFPFLVELQSSPECLVRKFLLEVIEEIGLRVL

Click here to download the sequence:
Link to NCBI Protein BLAST