Transcript Information: R_Transcript_240471.p1


Annotated TAIR IDAT3G61470.1
Annotated Gene Namephotosystem I light harvesting complex gene 2
Annotated Gene Symbol(s)LHCA2
Annotation TypeOrtholog
Chromosome Positionchr3:22745736-22747032 | Forward length=257
E-Value1.6E-162
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.946466129809
Replicate 25.5008757548235
Replicate 310.650365081606
Condition 2: 8 Hour
Replicate 17.8607758317724
Replicate 22.0628119779692
Replicate 33.2150454235372
Condition 3: 24 Hour
Replicate 15.8453457517033
Replicate 23.4995429235971
Replicate 34.2806212118286


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_240471.p1 GENE.R_Transcript_240471~~R_Transcript_240471.p1 ORF type:complete len:271 (+),score=69.19,Chloroa_b-bind|PF00504.17|4.2e-52 R_Transcript_240471:113-925(+)
ATGGCTTCTGTTTGTGCTTCTTCAGCCACTACTGCTGTTTCCATCTCTTCTCCAAGTTCACAGAAGAATGGAAATGTATTGGGGGCAACAAGGGCTTCTTTCTTAGGAGGCAAGAAGTTTAGAGTAACCAAATACAAGGCAGCAGCTGGTCGAAGGTCTTTCTCTGTCTCAGCAGCAGCAGCTGACCCAGAGAGACCTCTTTGGTTCCCTGGCAGCACCCCTCCTGCATGGCTTGATGGCAGCCTTCCTGGAGACTTTGGCTTCGATCCTCTTGGTCTGGGTTCTGATCCAGAGACATTGAGATGGATGGTACAAGCAGAACTAGTTCATTGTAGGTGGGCTATGTTGGGTGCAGCTGGGATTTTCATCCCAGAATTCCTAACAAAAATCGGAATCCTAAACACCCCTTCTTGGTACACTGCTGGTGAGCAAGAGTACTTCACAGACACCACCACCCTCTTCATTATTGAGCTCATTTTGATTGGTTGGGCCGAGGGCAGAAGATGGGCTGACATCATCAAGCCCGGTTGTGTCAACACTGACCCAATTTTCCCCAACAACAAGCTTACTGGTACTGATGTGGGCTACCCTGGTGGGCTTTGGTTTGATCCATTGGGCTGGGGCTCCGGCTCGCCCGAAAAGGTTAAGGAGTTGAGGACTAAGGAGATCAAGAATGGTAGGTTGGCCATGTTGGCTGTAATGGGTGCTTGGTTTCAACACATCTACACTGGGACTGGCCCAATTGACAACCTCTTTGCCCACCTTGCTGATCCTGGCCATGCCACAATTTTCGCTGCTTTTAGCCCCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_240471.p1 GENE.R_Transcript_240471~~R_Transcript_240471.p1 ORF type:complete len:271 (+),score=69.19,Chloroa_b-bind|PF00504.17|4.2e-52 R_Transcript_240471:113-925(+)
MASVCASSATTAVSISSPSSQKNGNVLGATRASFLGGKKFRVTKYKAAAGRRSFSVSAAAADPERPLWFPGSTPPAWLDGSLPGDFGFDPLGLGSDPETLRWMVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIIELILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK*

Click here to download the sequence:
Link to NCBI Protein BLAST