Transcript Information: R_Transcript_240985.p2


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.670205577556
Replicate 21.2350764950764
Replicate 31.4223137723101
Condition 2: 8 Hour
Replicate 11.0402491644254
Replicate 21.1691964361404
Replicate 31.7795696686654
Condition 3: 24 Hour
Replicate 11.2004082210564
Replicate 21.3694441794803
Replicate 32.0027965072978


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_240985.p2 GENE.R_Transcript_240985~~R_Transcript_240985.p2 ORF type:complete len:306 (+),score=36.88,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|6.5e-19 R_Transcript_240985:3781-4698(+)
ATGAAGATTATGGCTATATGTAGGAACTTCCTATGGGGTGGTTCAGACACATATAAAAGTCCTCCTCCAGTGGCTTGGGAATTCATCTGTCAAAAGAAAAAGTATGGAGGGTTGGGGATCAGAGACTGCATAGCGAGTAATATGGCTGCACTAGGGAATTATATATGGGCTATTTCTCAAAAAGAAGACTCACTGTGGGTGAAGTGGGTGCATAATGTATATATTATCCAAGGAGACTGGTGGGACCACACACCACCAATTGATTCAAGTTGGTCATGGAAGGTGCTTTGTCGTATGAGGGATAAATTCAAGGATGGTTTCAGGGGCAAATCTTGGACAGCATCTCCTCATGGAAAATACTCCTCCTCTAGTGGATATGAATGGCTAAGACAGGAAGGCACTAGAGTCCCATGGGATAAAATGGTTTGGAATCGGTTTAATATTCCTAAACACTCCTTTTTGGCCTGGATTATAATGCTGGGGAAAGTTAAAACAAGGGATCATCTTCATAAGATTGGGATTTGTCAAGATGTATCCTGCCCTCTATGTGATAAAGAACCAGAGACTATGGCCCATCTATTTTTTGTCTGTCCATTCAGTAATATAATGATCAACCTATTTTGTGATTGGATTGGGGTAATAAAGAAGGATTGGAGCCTGTTATCTCTTTCAAGATGGTTGCTCAGGAATTCTGGCCACTCTAGAACTGGAAGGAAGGTACTATATGCAGGGTATGTTGGATTGATATACTCAGTGTGGAAAGCTCGGAATCTTGCTGTTTGGGAAAGACTGATTCCTATCCCAGAACTGATGTTCAGGAAGCTACAGAAGCAGTTGCACTATAGAATTGTTTCTTGCATGTCTGTAAAAACCCCTCGACAGGAGAGAGAATGGATAGCTAGTATGTTTAGCATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_240985.p2 GENE.R_Transcript_240985~~R_Transcript_240985.p2 ORF type:complete len:306 (+),score=36.88,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|6.5e-19 R_Transcript_240985:3781-4698(+)
MKIMAICRNFLWGGSDTYKSPPPVAWEFICQKKKYGGLGIRDCIASNMAALGNYIWAISQKEDSLWVKWVHNVYIIQGDWWDHTPPIDSSWSWKVLCRMRDKFKDGFRGKSWTASPHGKYSSSSGYEWLRQEGTRVPWDKMVWNRFNIPKHSFLAWIIMLGKVKTRDHLHKIGICQDVSCPLCDKEPETMAHLFFVCPFSNIMINLFCDWIGVIKKDWSLLSLSRWLLRNSGHSRTGRKVLYAGYVGLIYSVWKARNLAVWERLIPIPELMFRKLQKQLHYRIVSCMSVKTPRQEREWIASMFSI*

Click here to download the sequence:
Link to NCBI Protein BLAST