Transcript Information: R_Transcript_24116.p1


Annotated TAIR IDAT5G51560.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20945807-20948613 | Forward length=680
E-Value1.6e-314
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.50718487997
Replicate 212.49341267461
Replicate 315.57256283949
Condition 2: 8 Hour
Replicate 114.247623171058
Replicate 213.893822781438
Replicate 315.312104280648
Condition 3: 24 Hour
Replicate 121.950885858068
Replicate 216.12226527089
Replicate 322.559695620267


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_24116.p1 GENE.R_Transcript_24116~~R_Transcript_24116.p1 ORF type:complete len:684 (+),score=129.31,Pkinase_Tyr|PF07714.13|5.9e-36,Pkinase|PF00069.21|2.1e-25,LRR_8|PF13855.2|4.4e-05,LRR_8|PF13855.2|3.5e-05,LRR_8|PF13855.2|2.5e-07,LRR_8|PF13855.2|0.097,LRR_8|PF13855.2|1.1e+04,LRR_8|PF13855.2|7.2e+03,LRRNT_2|PF08263.8|2.8e-07,LRR_4|PF12799.3|0.0057,LRR_4|PF12799.3|0.032,LRR_4|PF12799.3|27,LRR_4|PF12799.3|2.2,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|6.5e+03 R_Transcript_24116:410-2461(+)
ATGTTTCTCAAATTCCTACCCATCTTCTTGTTCTTCATCATTTTCTTAGCTCATTCCATTCAAACCTCAGAACTTGAATCTTTACTTGAGCTAAAAGCCTCACTTGACCCATCAAACAAGTATCTAACATCATGGGGTTCAAATGGTGACCCTTGCGATGGGACCCATGAAGGAGTTGGTTGTAATGAAATGGGTCAAGTTACCAACATTTCATTGCAAGGTAAAGGGCTTAAGGGTCAACTTTCCCCTGCTATTTCTGGGCTTAAACACTTGACTGGCCTTTACTTGCATTACAACTCTCTTTCTGGTGATATTCCTAAGGAAATTTCTTCTCTATCTAATCTTGTTGATCTTTACCTTGATGTTAACAATTTCTCTGGTGTCATTCCTCCTGAGATTGGCAATATGGAAAGCCTTCAAGTCTTGCAGCTATGCTATAATCAGCTAACAGGAAGCATACCAACACAGCTGGGGTCTCTGAAGAAGCTGAGTGTTTTAGCACTGCAGTCTAATCACCTGACAGGTGCAATCCCTGCTAGCTTAGGCAATGTAGAAACACTTGTTAGGCTGGACTTGAGCTTCAATCATCTCTTTGGCTCAATCCCCACACCTGTTGCTGAAGCTCCGTTGCTTCGATCTCTTGATATTCGAAACAATACTCTTTCTGGCAATGTTCCTCCGGCTCTCCAGAGATTAAGTGAAGGGTTTCGCTATGAAAACAATCCGGGACTATGTGGAGTTGGCTATCTTGCCTTGAAAGCTTGTCCTGATTCTGATCACCTTGATGAAACCAGACCCGAGGCCTATGGAGGAGGAACTACAAGTGGGCCTCGAACAAAAGATATCCCAGAAACTGCGAATGTTCAGGGAGATTGTAATGGCACCGAATGCTCAAAAGTCCCTCAGAAGAAGTCACATTCTTCTGTGGCAGTGGGTGTTGTGGTTGTCACCCTTGCATTGTCAATCATGAGTGTGTTCTTCTTCACCAAATACCGTCGGACCAAGCAGAAACTAGGGAGCTCATTTGAGATGGCAGATACACGTCTTAGTATTGACCAGCCTAGGGAGTTCTGTAGGAAAAATGGGTCTCCTCTAATTAGCCTCGAGTACCCTAATGGGTGGGACCCATTGTCAGATGGTCGAAATTTAAATGGGTTCTCGAATGAATTGATTCAAGGTTTTAGGTTCAATTTGGAAGAAGTAGAATGCGCCACTCAATACTTCTCACCCTCAAACTTGTTGGGTAAGAGTGGTTTCTCAGCTGTATACAGAGGAGTCTTAAGAGACGGGTCTGTCGTTGCTATTAAAAGGATCAGTAAAAGCAGCTGCAAGGCTGAGGAAGCTGAGTTCCTCAAGGGTTTGAATCTCTTGACCTCCTTGAGGCATGATAATCTGGTTAAGTTACGAGGCTTTTGCTGTTCAAAGGGAAGGGGTGAATGCTTCTTGATCTACAATTTCGTTCCCAATGGGAATTTGCTAAGGTATCTGGACCTGAAAGATGGAGATGCTAATGTTCTCGAATGGTCTACTCGTGTTCGAATCATCCATGGCATTGCCAAAGGAATACAATATTTGCATAGCACTAAAGGGAACAAACCAGCTCTTGTTCACCAAAACATTTCGGCTGAGAAGGTCCTAGTCAACCAACGATACAACCCCATGCTCTCGGATTCAGGCATTCACAAGCTCCTCACCAACGACACAGTCTTCTCAGCGCTCAAGGCTAGTGCAGCAATGGGATATTTAGCACCAGAGTACACTACAACTGGTCGGTTCACTGAAAAAAGCGATGTCTATGCGTTTGGCACGCTTGTTTTCCAAGTCCTTTCCGGGAGGAGGAAAATCACCAATGCCATTCGAGTTGGTGCTGAATCGATGAGGTCTCAGGAATTTATCGACCCCAATCTTCACGGAAGGTTCTCAGAGTATGAGGCGGCTAAGCTTGCTAAACTTGCTTTGAATTGTACTTATGATTCCCCTGGAGAAAGGCTGTTGATGGATGCAATTATTCTTGAATTAGGAAACTGTACTAGTTGCTACCGATCTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_24116.p1 GENE.R_Transcript_24116~~R_Transcript_24116.p1 ORF type:complete len:684 (+),score=129.31,Pkinase_Tyr|PF07714.13|5.9e-36,Pkinase|PF00069.21|2.1e-25,LRR_8|PF13855.2|4.4e-05,LRR_8|PF13855.2|3.5e-05,LRR_8|PF13855.2|2.5e-07,LRR_8|PF13855.2|0.097,LRR_8|PF13855.2|1.1e+04,LRR_8|PF13855.2|7.2e+03,LRRNT_2|PF08263.8|2.8e-07,LRR_4|PF12799.3|0.0057,LRR_4|PF12799.3|0.032,LRR_4|PF12799.3|27,LRR_4|PF12799.3|2.2,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|6.5e+03 R_Transcript_24116:410-2461(+)
MFLKFLPIFLFFIIFLAHSIQTSELESLLELKASLDPSNKYLTSWGSNGDPCDGTHEGVGCNEMGQVTNISLQGKGLKGQLSPAISGLKHLTGLYLHYNSLSGDIPKEISSLSNLVDLYLDVNNFSGVIPPEIGNMESLQVLQLCYNQLTGSIPTQLGSLKKLSVLALQSNHLTGAIPASLGNVETLVRLDLSFNHLFGSIPTPVAEAPLLRSLDIRNNTLSGNVPPALQRLSEGFRYENNPGLCGVGYLALKACPDSDHLDETRPEAYGGGTTSGPRTKDIPETANVQGDCNGTECSKVPQKKSHSSVAVGVVVVTLALSIMSVFFFTKYRRTKQKLGSSFEMADTRLSIDQPREFCRKNGSPLISLEYPNGWDPLSDGRNLNGFSNELIQGFRFNLEEVECATQYFSPSNLLGKSGFSAVYRGVLRDGSVVAIKRISKSSCKAEEAEFLKGLNLLTSLRHDNLVKLRGFCCSKGRGECFLIYNFVPNGNLLRYLDLKDGDANVLEWSTRVRIIHGIAKGIQYLHSTKGNKPALVHQNISAEKVLVNQRYNPMLSDSGIHKLLTNDTVFSALKASAAMGYLAPEYTTTGRFTEKSDVYAFGTLVFQVLSGRRKITNAIRVGAESMRSQEFIDPNLHGRFSEYEAAKLAKLALNCTYDSPGERLLMDAIILELGNCTSCYRSP*

Click here to download the sequence:
Link to NCBI Protein BLAST