Transcript Information: R_Transcript_241436.p1


Annotated TAIR IDAT5G33340.1
Annotated Gene NameEukaryotic aspartyl protease family protein
Annotated Gene Symbol(s)CDR1
Annotation TypeOrtholog
Chromosome Positionchr5:12594474-12595787 | Forward length=437
E-Value9.1E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2305366935765
Replicate 21.2739328342473
Replicate 31.956080963267
Condition 2: 8 Hour
Replicate 14.5120020801665
Replicate 22.3114619431338
Replicate 32.5289884459865
Condition 3: 24 Hour
Replicate 110.524477920116
Replicate 26.0961726821146
Replicate 34.7218419099823


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_241436.p1 GENE.R_Transcript_241436~~R_Transcript_241436.p1 ORF type:complete len:445 (+),score=32.88,TAXi_N|PF14543.2|2.5e-33,TAXi_N|PF14543.2|8.3e+03,TAXi_C|PF14541.2|1.2e-22,Asp|PF00026.19|6.5e-16 R_Transcript_241436:31-1365(+)
ATGCAATCTTGTTTGGTAGTTCATTTTTTGATATTCGTACTAGTATCCTTATGCTATGAGCAACTAGCCAAACAGGTCTCGGTTGAAGCTAGGAAGCTAAATTCAAATGGTGCCTCAACTTTCATAGTTGAGCTCATCCACCGCGACTCACCACACTCTCCCTACTACAACCCATCGAAAAGACCAAACTTGTTGGGATCAATCTCAGGCAATCATAAGATTCAATTGTCCTCTACTAATGATGAGAAAAATTTTGACAGAGATCTAATCCCCAATGGAGGTGATTACCTCATGAAGCTTGGCATTGGCACCCCGCCAGTCGAGTTTATAGGCAATGCAGACACTGGGAGTGACCTCGTTTGGGTCCAATGCTCGCCCTGTAGCCCTTGTATCCCACAGAATTCACCCCTTTTCGACTCCAACAAATCTTCAACCTACCAAGCTATCCCCTGTATTTCTCAATCTTGCACACCTACTGATCTTTCTATTAGCGGTTGTCTAAACGATGACCCTTATTGTGTTTATGGCTATAGTTATGGGGATAGCACTCAAAGCGTTGGTTATCTTGCTAAAGAAACCATTACCTTCACTTCAGCTGATGGTTCATCAATGACAGCTTTTCCTAACTCCACTTTTGGATGTGGACATGCACAGAAGGGAAGCTTTGGGATTCAAGGCAATGGCATCTTTGGGCTTGGACTTGGGCCTTTGTCCCTTGTCTCGCAGCTCGCCCCAACTATTAACCACAAATTCTCATACTGCTTGGCTCCCCTGACTTCAGGGGTTAACAGTAAGCTGAAATTCGGGGCTGATGTGATAGGCCCCCAAGTAGTATCAACTCCTTTTACAACCAAACCACCAGTTTATACCAATTACTACCTTACACTGAATAGTATTACCATCGATGGGGGTAGTTCAGTCCCGGTGGGGCAGGACGTGATCATCGACTCCGGTACCACTCTGACGTTACTAGAATCAAGCGTGTATGATAGTGTCAAGACCGCCATAAGCGGTGCAATTGGGGGAAGCCCAGTGCCTGACCCGAACAACATATATGACCTTTGCTATGAAACAAAACAAGAGTCAGGCACTGGAAGTGAGGGTTATAAGTTGAGCCCCCCTGATGTGGTGTTCAATTTTAAAGGGGCTAATGTTGTGTTAAAGTCAATTAATACTTTCAGGCAAATCCAAGGTGATTTGGTTTGTTTGGCAATGATGCCCACAAAGCAAACTTTCATATTTGGGAATATTGCTCAAGTCAACTTTGAGGTTGGGTATGATTTGCAAGCTAAGCAAGTGTCCTTTGTTCCAGCAGACTGCTCCAAGTATGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_241436.p1 GENE.R_Transcript_241436~~R_Transcript_241436.p1 ORF type:complete len:445 (+),score=32.88,TAXi_N|PF14543.2|2.5e-33,TAXi_N|PF14543.2|8.3e+03,TAXi_C|PF14541.2|1.2e-22,Asp|PF00026.19|6.5e-16 R_Transcript_241436:31-1365(+)
MQSCLVVHFLIFVLVSLCYEQLAKQVSVEARKLNSNGASTFIVELIHRDSPHSPYYNPSKRPNLLGSISGNHKIQLSSTNDEKNFDRDLIPNGGDYLMKLGIGTPPVEFIGNADTGSDLVWVQCSPCSPCIPQNSPLFDSNKSSTYQAIPCISQSCTPTDLSISGCLNDDPYCVYGYSYGDSTQSVGYLAKETITFTSADGSSMTAFPNSTFGCGHAQKGSFGIQGNGIFGLGLGPLSLVSQLAPTINHKFSYCLAPLTSGVNSKLKFGADVIGPQVVSTPFTTKPPVYTNYYLTLNSITIDGGSSVPVGQDVIIDSGTTLTLLESSVYDSVKTAISGAIGGSPVPDPNNIYDLCYETKQESGTGSEGYKLSPPDVVFNFKGANVVLKSINTFRQIQGDLVCLAMMPTKQTFIFGNIAQVNFEVGYDLQAKQVSFVPADCSKYA*

Click here to download the sequence:
Link to NCBI Protein BLAST