Transcript Information: R_Transcript_241519.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.6004263471947
Replicate 20.41440066611115
Replicate 31.0549155471912
Condition 2: 8 Hour
Replicate 10
Replicate 20.88266638846785
Replicate 30.3582554727708
Condition 3: 24 Hour
Replicate 10.45311461633626
Replicate 20.43530116231403
Replicate 30.43199417145192


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_241519.p1 GENE.R_Transcript_241519~~R_Transcript_241519.p1 ORF type:5prime_partial len:152 (+),score=14.81,zf-RVT|PF13966.2|5.8e-08,zf-RVT|PF13966.2|6.8e+03 R_Transcript_241519:3-458(+)
CTAATCTTAGGGAGGATCAATACTAACGATATGTTGCAGAGATGGAGACCGGGGTGTTGTCTTTCCCCTGATGTTTGCGTTATGTGTGGTGCAAGCGGGGAGTCGGTGGCTCATCTTTTTTTGCATTGCAAGGTGGCTCAATGTTTGTGGAGGAAGCTCTTTGGGGTGAAAGGGGAGGACGTGGTGTTTCCATCCAGTGTCCTTGAGTTCCTACAGGTTCATTGGGTGGGATTTGGGAGGAATAAGGAGTTGAAACTTCTTTGGAGGAATGCTATCCTTGGTACTTTGTGGTGTATTTGGTTGGAGCGTAATGGCAGGGTGTTCTCTCAGCCGACGTTTCATCCTGCGTCGGTTTGGGAGCGCATCACTTTTTTGGCTAGTTTATGGTCTAAGGCTTCAGGAGCTTTTAGAAGCTATTCTATTAATGAAGTCCAGCGTAATTGGGCTTGCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_241519.p1 GENE.R_Transcript_241519~~R_Transcript_241519.p1 ORF type:5prime_partial len:152 (+),score=14.81,zf-RVT|PF13966.2|5.8e-08,zf-RVT|PF13966.2|6.8e+03 R_Transcript_241519:3-458(+)
LILGRINTNDMLQRWRPGCCLSPDVCVMCGASGESVAHLFLHCKVAQCLWRKLFGVKGEDVVFPSSVLEFLQVHWVGFGRNKELKLLWRNAILGTLWCIWLERNGRVFSQPTFHPASVWERITFLASLWSKASGAFRSYSINEVQRNWACL*

Click here to download the sequence:
Link to NCBI Protein BLAST