Transcript Information: R_Transcript_242110.p1


Annotated TAIR IDAT4G00170.1
Annotated Gene NamePlant VAMP (vesicle-associated membrane protein) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:70732-72085 | Reverse length=239
E-Value1.8E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 156.838334112162
Replicate 257.939158110797
Replicate 358.088393651003
Condition 2: 8 Hour
Replicate 150.934731725704
Replicate 263.969105014025
Replicate 373.372333225024
Condition 3: 24 Hour
Replicate 161.80202958344
Replicate 263.373971748874
Replicate 362.430752609041


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_242110.p1 GENE.R_Transcript_242110~~R_Transcript_242110.p1 ORF type:complete len:237 (+),score=45.65,Motile_Sperm|PF00635.22|3.6e-32 R_Transcript_242110:197-907(+)
ATGAGTACTGGCGATCTTCTCAATATTCAGCCCTCAGAGCTAAAATTTCCTTTTGAATTGAGGAAGCAGAGTTCATGTTCTATGCGGTTAACTAACAAGACGAACAATTATGTCGCGTTTAAGGTTAAAACGACCAATCCTAAGAAGTATTGTGTACGCCCCAATACCGGCATCATATCGCCTGGAGTCACATGTGATGTTACAGTTACTATGCAAGCGCAGAGAGAAGCTCCAGCTGATATGCAGTGCAAGGACAAGTTTTTAGTTCAGAGTGTTATTGCACTTGATGGCAGTACTGCAAAGGATTTATCCCCTGATATTTTCAACAAAGAGGAGGGGAAGGTTGTTGAGGAGTTCAAATTGAGGGTTGTTTATATTCCTGCTAATCCTCCCTCGCCAGTACCTGAGGAATCTGAAGAAGGGTCTCCACCTCGTGAGGAAGGAAATGAACATGTTTCATTAGCATCAGCGGTGACAAGATCTTTTGTGGGTGACTCTAAAGAGAATTCTTCCGAGACGAAGGCTTTGATTTCGAAGTTGACAGACGAGAAAGCATCTGCCATTCAACAAAACCAGAAACTTCGTCAAGAATTGGACATGCTGAGAAGAGAAGTCAGCAGAAACCGTTCCACTGGTGGTGTATCCATATGGTTCATGGTGCTGATTGCTATTATTGGCGTTACAATTGGATACTTCCTAAAGAGAACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_242110.p1 GENE.R_Transcript_242110~~R_Transcript_242110.p1 ORF type:complete len:237 (+),score=45.65,Motile_Sperm|PF00635.22|3.6e-32 R_Transcript_242110:197-907(+)
MSTGDLLNIQPSELKFPFELRKQSSCSMRLTNKTNNYVAFKVKTTNPKKYCVRPNTGIISPGVTCDVTVTMQAQREAPADMQCKDKFLVQSVIALDGSTAKDLSPDIFNKEEGKVVEEFKLRVVYIPANPPSPVPEESEEGSPPREEGNEHVSLASAVTRSFVGDSKENSSETKALISKLTDEKASAIQQNQKLRQELDMLRREVSRNRSTGGVSIWFMVLIAIIGVTIGYFLKRT*

Click here to download the sequence:
Link to NCBI Protein BLAST