Transcript Information: R_Transcript_242183.p1


Annotated TAIR IDAT2G41410.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17262085-17262735 | Reverse length=216
E-Value5.9E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1176.52641349986
Replicate 2164.51767837304
Replicate 3159.93993228247
Condition 2: 8 Hour
Replicate 1126.12941099492
Replicate 2167.35877786914
Replicate 3178.28915320469
Condition 3: 24 Hour
Replicate 1140.60381493234
Replicate 2133.70388056332
Replicate 3140.85953949612


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_242183.p1 GENE.R_Transcript_242183~~R_Transcript_242183.p1 ORF type:complete len:225 (+),score=-2.66,EF-hand_1|PF00036.28|6e-06,EF-hand_1|PF00036.28|7.8e-06,EF-hand_1|PF00036.28|9.8e-08,EF-hand_1|PF00036.28|5.1e-06,EF-hand_7|PF13499.2|1.6e-12,EF-hand_7|PF13499.2|9.4e-10,EF-hand_6|PF13405.2|1.3e-06,EF-hand_6|PF13405.2|0.011,EF-hand_6|PF13405.2|2.7e-07,EF-hand_6|PF13405.2|0.46,EF-hand_5|PF13202.2|8.8e-06,EF-hand_5|PF13202.2|0.0018,EF-hand_5|PF13202.2|2.7e-06,EF-hand_5|PF13202.2|0.026,EF-hand_8|PF13833.2|2.6,EF-hand_8|PF13833.2|1e-07,EF-hand_8|PF13833.2|0.00091,EF-hand_8|PF13833.2|0.31 R_Transcript_242183:167-841(+)
ATGAAGCAACTCCTCAAATCCATCAACCCCAAACAAATCTTCCGTTTGAAGAAGTCCAGATCCGTCTCGAAATCCGCCCCGACTTCTTTCTCTCTCAACTCCAACTACTCATCCTCCACCTCATCCTCCGACTCCTCCGTCAAGGACTCCCGGTCCGTCACCCTCCCTGTCCGAACCCGGTCCGACGACTGGTCCGATTCCTCCCCCGCCACGTCACCCACGTCCGCCCTCAACTTCGACTACGTCCAAGCGTTCAAGATGCTGGACCGTGACAACGACGGGAAGATCACGCGCCTTGAGCTCGAATCCCTCCTGAAGCGCGTCGTATCCACCACCAAAGGCGCAGAGGAGGTCGAAGCCATGATTCTCGAGATCGACCGTGACGGCGACGGTTGCATCTCACTCGACGAGCTCCGCACCGTCGGATCCGCCTTCGAATCGACGGCTCTCGTTGAAGAACACGAGCTCAAGGAAGCCTTCGACATCTTCGACTCCGACCACGACGGCAAGATCACCGCCGAGGAGCTCCACGAGGTGTTCCTCATGTTGGGGGACGACCGGTGCACGTTAGCCGATTGCCGGCGTATGATAGAGAGTGTTGATAAGAACGGGGATGGGTTCGTCTGTTTCCAGGACTTCCTTCTTATGATGGACCACCAACAACATCAACGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_242183.p1 GENE.R_Transcript_242183~~R_Transcript_242183.p1 ORF type:complete len:225 (+),score=-2.66,EF-hand_1|PF00036.28|6e-06,EF-hand_1|PF00036.28|7.8e-06,EF-hand_1|PF00036.28|9.8e-08,EF-hand_1|PF00036.28|5.1e-06,EF-hand_7|PF13499.2|1.6e-12,EF-hand_7|PF13499.2|9.4e-10,EF-hand_6|PF13405.2|1.3e-06,EF-hand_6|PF13405.2|0.011,EF-hand_6|PF13405.2|2.7e-07,EF-hand_6|PF13405.2|0.46,EF-hand_5|PF13202.2|8.8e-06,EF-hand_5|PF13202.2|0.0018,EF-hand_5|PF13202.2|2.7e-06,EF-hand_5|PF13202.2|0.026,EF-hand_8|PF13833.2|2.6,EF-hand_8|PF13833.2|1e-07,EF-hand_8|PF13833.2|0.00091,EF-hand_8|PF13833.2|0.31 R_Transcript_242183:167-841(+)
MKQLLKSINPKQIFRLKKSRSVSKSAPTSFSLNSNYSSSTSSSDSSVKDSRSVTLPVRTRSDDWSDSSPATSPTSALNFDYVQAFKMLDRDNDGKITRLELESLLKRVVSTTKGAEEVEAMILEIDRDGDGCISLDELRTVGSAFESTALVEEHELKEAFDIFDSDHDGKITAEELHEVFLMLGDDRCTLADCRRMIESVDKNGDGFVCFQDFLLMMDHQQHQR*

Click here to download the sequence:
Link to NCBI Protein BLAST