Transcript Information: R_Transcript_24220.p1


Annotated TAIR IDAT5G64420.1
Annotated Gene NameDNA polymerase V family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25756416-25761122 | Forward length=1306
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.925999816122
Replicate 212.623943864005
Replicate 316.00260406834
Condition 2: 8 Hour
Replicate 113.310851817116
Replicate 213.61854330203
Replicate 316.624839633625
Condition 3: 24 Hour
Replicate 120.025501631642
Replicate 218.430913387531
Replicate 320.166008290187


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_24220.p1 GENE.R_Transcript_24220~~R_Transcript_24220.p1 ORF type:complete len:1284 (+),score=357.94,DNA_pol_phi|PF04931.9|1.6e+04,DNA_pol_phi|PF04931.9|8.3e-183,DNA_pol_phi|PF04931.9|3.8e+02 R_Transcript_24220:703-4554(+)
ATGGGAAGCAAGAAAAAAGAAGTTAATTCAATGGATGTGGAGGAAGTAAATGTATTAGCTGAAGGTGGTGAATTTAATAATGGGACAAGTAAAAAGAAGGATTCCAAGAAGAAAAGGAGAAGGGATAAGAAAAATGATGATGGGGTTGATAATGAAGGTGGGAGTGATGCTCCATCAACCCCTACTCTGAGTTCGGCGAAACCTATGGAGAGGAGAAAGAAAAGGAAAATGTTGGATAAGGAGAGGCACAGGGTTGCTTTGGAGAGCAAGGAATCAAAGCTGAAACAACAGGAAAGTTCTATGGTGAAAAGTGACGAGGAAGGGGCGACAAGTGGTGCTAATAATGGCATGCCTGTGTTCCACATTGGTGTGTTTAGTGATTTGGCCTCAGCTGATGCCTCCAAAAGAGCGGCTGCTGCTGAGAGATCGGTGGTGGAGTTGCGGGATGTACAGAAGGCGTATGATGAGATGGAGACCAAGGAAGTTGGTGAAGGTGGGGTGCAGTTGGAAGCTGAGAAGGATGATGGTTTGGATGATTGTGCACCTTCAGTAAGATATGCTGTAAGAAGGCTTATTCGCGGTGTTTCTTCATCAAGAGAGTGTGCAAGACAAGGATTTGCGTTGGGATTGACTCTTTTGATCAGTATAAATCATAAGATAAGGGTTACTTCGTTGCTAAAACTGATAGTTGATTCATTGGAGGTCTCCTCTTCAATGAAAGGCCAGGAAGCAAAGGATTCCCTTTTAGGCCGTCTTTTTGCCTATGGTGCCATTGTAAGATCTGGGAGACTAAGTGAAGAGTGGACTTCTGATAAGAATACTCCATACATCAAAGAGTTTACAAGTCATCTTATATCTCTTGCATCCAAAAGACAATACTTGCGAGACCCAGCTGTTGCAGTGCTTTTGAGCTTAATTGAATTTTTGCCCAAAGAAGCTGTGGTGAACCATATCCTTGAAGCTCCTGGACTTTGTGAGTGGTTTGAAGGAGCCACTAATCCTGGGAATCCTGATGCTCTGCTTCTAGCGCTGAAAATTCGGGAAAAGATTGACATAGACAGTACTGTCTTTGGCCAGCTTCTGCCTCACCCATTTAGCTCTAGCAGGTTCTTCACTGTAAACCATTTGGCTTCCCTTGTTAGTTGCATGAAGGAATCTACATTTTGTCAGCCACGAGTTCATGGTATCTGGCCTCACCTGATCGACATTCTTTTACCTGATTCAGTCTTACAAGAGGCTAATTCTGCCTCAAGTTTGAATTCGACCAAAAAACAGAAGAGAAGTCGCAGATCTAGCTCTTCTGATGAAGATGTTTCAAAGAGCCTTAAGTGTTTTTGCGAGGTGATCCTTGAGGAATCCATTCTGACATCATCACATGATCGCAAACATTTAGTGTTTGATGTTTTGCTTCTGATGCTTCCAAGGCTACCAGCTTCATGTGTGCCAACTGTTCTCTCCCACAAGTTTGTTCAATGCCTCATGGATATTCTGAAAACAAAGGACTCTTGGCTGCACAAAGTTGCTGAGCACTTTCTTAAAGAATTATCAGACTGGGTTGGATCTGATGACATTAGAAGAGTGTTTGTGGTTGTGGCGCTGCAGAAGCATAGTGGTGGGAGGTTTGATTCTATTACTAGGACAAAAACAATTAAAAATCTGATGGCAGGTTTCACAACTGAATCTGGTAGCATGTTGTTCATTCAAAAGTTGACTAGCATGTTCATTGATGAAGAGCATGCCGCAGATGAACCTTCAGATCAAAGCCAAACAACAGACGACAATGAGAATTCAGAGATGGGTGTTGAGGAAAAGGAGTCTTCTGGGAGCTCTGCTGATACTGATTTCATGAGTTGGGTTGTGGAATCGCTCCCAGGTGTCCTAAAGCACTTGACACTGGATCCTGAAGCAATGTTTCGGGTACAAAAGGAAGTTATGAAGTTCCTAGCTGTGCAGGGTCTATTTTCTGCTTCTCTTGGTACTGAAGTGACCTCTTTTGAACTACAAGAAAAGTTTAGATGGCCAAAAGTACCGATTTCAAGTGCTCTTAGCAAGATGTGTATTGAGCAGCTTCAGTTATTACTTTCTATTGCTCAAAAAGCTGGGGGTCCTCTTGTTGTGTCAAACAACCTTGAGACAAATGACCTGGGTTATTACTTTATGCGCTTTCTTGGCACCTTATGCACCATTCCTTCTGTTTCCCTGGTACGGCCTTTGAGCCATGAGGATGAGAAGGAATTCAAGAAATTACAAGCCATGGAATCAAGGCTCTCTAAGGAGGAGAGAAATTATGAGGTTAGCAGCGAGGCTAATAAACTGCGTGCGTTGAGGTACCTGCTTATCCAATTGCTGCTTCAGCTTCTCTTGCAGCCTGGAGAATTCTCTGAAGCTGCTTCTGAGCTTATAATATGTTGCCGTAAAGCATTTTCTGTGCATGATCTTCTTGAGTCTTCTGGGGAGGATGAATCTGAAGATGGTGAATCACCTGAGATGATGGAGGTTTTGGTTGACACACTGCTTTCATTGCTGCCCCAATCATCAGCTCCGCTGAGGTCTTCTGTTGAACAGGTTTTTAAATACTTCTGTAGAAGTATTACCGATGATGGGTTGCTTCGGATGCTGCGGGTGATAAAGAAAGATTTAAAACCAGCTAGGCATAAGGATGCTAGTAGTGAAGATGACGACGACGATGATCTTCTAGGCATTGAAGAAGCTGAGGAGTCAGATGAAGATGACATGGTGGAGAGTGGTCAGACCAATGAACAAATGGATAACTCTAAGGCCCTATCTTCTGATGGTGGTGATGAGTCGGATGATGATGAATCAGATGACGATGATTCAGATGAAGACATGGATGATGATGCCATGTTTCGTATGGATGCCTATCTTACAAAGATTTTTCAGGAGCGCAAGAACCAAGCTGGGGGTGACACTGCGCATGCCCAACTTGTCCTTTTTAAGCTCCGTGTGCTTTCGTTGCTAGAAATTTTTCTTCATGAGAATGCAGAGTCGTCCAAAGTTCTGATTGTATATTCAAACTTGGTCCGAGCATTTGTAAATCCCAGTACTACTGAGGGTAGTGAGCAGCTTGCTCAACGCTTGTGGGGAATTTTGCAGAAGAAGATCTTCAAGGCAAAGGACTATCCCAAGGGAGAAGATGTTCAACTCTCTGCCTTGGAACCTCTGCTGGAGAAGAGCCTCCGATTAGCTTCCAGGCCGTTCAGGAAAAAGAAATCCACTGGTAATGTAGCGCCAAAGAAAGAATCTCTCTCCAGGAACCGCTACAAAATGATTAACTCACTTGCTCAGCAATCAACTTATTGGATACTGAAGATTATTGACGGAAATAAATTTCCTGAGGCTGAACTCGATCGGATATTCGAGATTTTCAAGAATTCCCTGGTGAGTTACTTTAAAAACAAGAAGTGTCAACTGAAGCCAGAGTTCTTGAAGGAAGTTTTCAAGAGAAGGCCTCGGGTAGGGCACCATTGTTTTGAAACCCTTCTGGAAAGCTGTACTGATGCGAAGTTTGATTATCGACGGGTGGAAGCTCTGGAATTAGTATTGGAAATATTGAAGTCACTCCAGGCAGAAAATGCTCCAGATAAATCAAAGAAGACTTTGAAGGGTCATTTGTCCAAAATGAGCCACTTGATAAAAGAACTGATAACAAATATGCCTGAAAAGCAGTCGAGACGGGCCGAAGTAAGGAAGTTTTGTGGTAAGGTCTTTCAGATATTATCTACCCACAGCTTGAGCAAAGCCTTTCTGAAAACCCTAAACCAACAAGCTATTACTGCTTGTGAATCTCAACTTGGTGATGCATTTCTGGTTTTGAGGAGAATCGAAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_24220.p1 GENE.R_Transcript_24220~~R_Transcript_24220.p1 ORF type:complete len:1284 (+),score=357.94,DNA_pol_phi|PF04931.9|1.6e+04,DNA_pol_phi|PF04931.9|8.3e-183,DNA_pol_phi|PF04931.9|3.8e+02 R_Transcript_24220:703-4554(+)
MGSKKKEVNSMDVEEVNVLAEGGEFNNGTSKKKDSKKKRRRDKKNDDGVDNEGGSDAPSTPTLSSAKPMERRKKRKMLDKERHRVALESKESKLKQQESSMVKSDEEGATSGANNGMPVFHIGVFSDLASADASKRAAAAERSVVELRDVQKAYDEMETKEVGEGGVQLEAEKDDGLDDCAPSVRYAVRRLIRGVSSSRECARQGFALGLTLLISINHKIRVTSLLKLIVDSLEVSSSMKGQEAKDSLLGRLFAYGAIVRSGRLSEEWTSDKNTPYIKEFTSHLISLASKRQYLRDPAVAVLLSLIEFLPKEAVVNHILEAPGLCEWFEGATNPGNPDALLLALKIREKIDIDSTVFGQLLPHPFSSSRFFTVNHLASLVSCMKESTFCQPRVHGIWPHLIDILLPDSVLQEANSASSLNSTKKQKRSRRSSSSDEDVSKSLKCFCEVILEESILTSSHDRKHLVFDVLLLMLPRLPASCVPTVLSHKFVQCLMDILKTKDSWLHKVAEHFLKELSDWVGSDDIRRVFVVVALQKHSGGRFDSITRTKTIKNLMAGFTTESGSMLFIQKLTSMFIDEEHAADEPSDQSQTTDDNENSEMGVEEKESSGSSADTDFMSWVVESLPGVLKHLTLDPEAMFRVQKEVMKFLAVQGLFSASLGTEVTSFELQEKFRWPKVPISSALSKMCIEQLQLLLSIAQKAGGPLVVSNNLETNDLGYYFMRFLGTLCTIPSVSLVRPLSHEDEKEFKKLQAMESRLSKEERNYEVSSEANKLRALRYLLIQLLLQLLLQPGEFSEAASELIICCRKAFSVHDLLESSGEDESEDGESPEMMEVLVDTLLSLLPQSSAPLRSSVEQVFKYFCRSITDDGLLRMLRVIKKDLKPARHKDASSEDDDDDDLLGIEEAEESDEDDMVESGQTNEQMDNSKALSSDGGDESDDDESDDDDSDEDMDDDAMFRMDAYLTKIFQERKNQAGGDTAHAQLVLFKLRVLSLLEIFLHENAESSKVLIVYSNLVRAFVNPSTTEGSEQLAQRLWGILQKKIFKAKDYPKGEDVQLSALEPLLEKSLRLASRPFRKKKSTGNVAPKKESLSRNRYKMINSLAQQSTYWILKIIDGNKFPEAELDRIFEIFKNSLVSYFKNKKCQLKPEFLKEVFKRRPRVGHHCFETLLESCTDAKFDYRRVEALELVLEILKSLQAENAPDKSKKTLKGHLSKMSHLIKELITNMPEKQSRRAEVRKFCGKVFQILSTHSLSKAFLKTLNQQAITACESQLGDAFLVLRRIET*

Click here to download the sequence:
Link to NCBI Protein BLAST