Transcript Information: R_Transcript_24226.p1


Annotated TAIR IDAT5G64270.1
Annotated Gene Namesplicing factor, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25706909-25710718 | Forward length=1269
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 144.637437064167
Replicate 225.953074083204
Replicate 334.87213935226
Condition 2: 8 Hour
Replicate 139.753521914351
Replicate 243.722100729471
Replicate 359.423390376075
Condition 3: 24 Hour
Replicate 148.742575815996
Replicate 237.83125583819
Replicate 351.019810454478


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_24226.p1 GENE.R_Transcript_24226~~R_Transcript_24226.p1 ORF type:complete len:1275 (+),score=380.92,SF3b1|PF08920.6|3e+02,SF3b1|PF08920.6|4.1e-43,HEAT_2|PF13646.2|1.6e+04,HEAT_2|PF13646.2|1.1,HEAT_2|PF13646.2|0.31,HEAT_2|PF13646.2|1.6e+02,HEAT_2|PF13646.2|4.3,HEAT_2|PF13646.2|0.29,HEAT_2|PF13646.2|0.036,HEAT_2|PF13646.2|1.3,HEAT|PF02985.18|4.1e+03,HEAT|PF02985.18|5.1e+03,HEAT|PF02985.18|3.3e+03,HEAT|PF02985.18|4.2e+02,HEAT|PF02985.18|0.015,HEAT|PF02985.18|7.9e+03,HEAT|PF02985.18|7.1,HEAT|PF02985.18|7.9e+03,HEAT|PF02985.18|44,HEAT|PF02985.18|1.9e+02,HEAT|PF02985.18|3.9,HEAT|PF02985.18|1e+03,HEAT_EZ|PF13513.2|1.5e+03,HEAT_EZ|PF13513.2|4.8e+03,HEAT_EZ|PF13513.2|47,HEAT_EZ|PF13513.2|23,HEAT_EZ|PF13513.2|1,HEAT_EZ|PF13513.2|8.4e+03,HEAT_EZ|PF13513.2|15 R_Transcript_24226:238-4062(+)
ATGGCGTCAGTAGACCCAGAGATAGCCAAGACCCAGGAAGAGAGGAAAAAAATGGAGCAGGAGTTGGCCTCTCTCACTTCTGTGGCTTATGATGTCGATCTATATGGCAGCAACGGGCGTGACGATTATGTCCAGTCCATTCCTGTCGATGATGATGAGGAGAACGCAGATGCTATGGATAATGAGGTGGCTCGGAAACTGGCCTCTTACACGGCGCCCAAGTCTCTGCTGAAGGAGATGCCAGGTTTAGGGGGTGATGCTGATGATGGGTTCCGTAAGCCACAGAGGATTATTGATCGCGAGGATGATTACCGGAGGAGGAGATTGAGTAGGGTTATATCGCCGGAGAGGCATGATGCTTTTGCTATGGGGGATAAGACCCCTGATGTGAATGTGCGGACATATGCTGATGTGATGAGGGAGGAGGCGTTGAAGAGAGAGAAAGAGGAGACGTTGAGGGCTATTGCTAAGAAGAAGAAAGAGGAGGAGGAGCAGAAGAAGTCGATGGAAGAAGAGAAAGGGGCTGATGGTGCTCAAGCTCAGCAGTCACAGAAGAGGAGGAATAGGTGGGACCAATCGCAAGATCAGCAGGCTGATGGTGGAGCTGCAAAGAAGGCTAAATCTGCATCAGATTGGGATATGCCAGATTCTACCCCGGGGATTGGCAGGTGGGATGCTACTCCTACACCAGGGAGACTTGGGGATGCTACACCATCAGTAAGGAGGAATAGGTGGGATGAGACACCGACACCTGGCAGGGTAAATGATTCAGATGCCACTCCGGCTGCTGGTGGGGCCACTCCAGGTGCAACTCCTGCTGGAATGACTTGGGATGCGACTCCAAAGCTCTCAGGGATGGCAACACCGACCCCAAAAAGGCAGAGGTCAAGGTGGGATGAGACACCGGCTACAATGGGGAGTGCAACACCCATGGCTGGGGCTACCCCTTCTGCAGCTATGACCCCTGGTGTGACTCCTGTTGGTGGTGTTGAACTGGCTACACCAACTCCAGGGCAGATTAATCTGCGTGGCCCTCTTACACCAGAGCAGTACAACTTGATGAGATGGGAGAAGGATATTGAGGAGAGAAACAGGCCTTTGACTGATGAAGAGCTTGATGCCATGTTCCCATCTGAAGGTTATAAGATCTTGGACCCTCCAGCATCATATGTCCCAATTAGGACTCCAGCTAGGAAGCTGCTTGCCACGCCTACTCCAATGGGGACTCCACTTTATCAGATTCCGGTGGAGGACAGGGGTCAGCAGTTTGATGTTGGTAAGGAGCCTGCTAATGGATTGCCATTCATGAAGCCAGAGGATTATCAATACTTTGGCGTATTGCTGAATGAAGAGAATGAGGAAGAATTGTCTCCAGAGGAGCAGAAGGAAAGAAAGATTATGAAGTTGCTTCTTAAAGTTAAGAATGGCACACCACCTCAAAGGAAGACTGCTTTGAGACAACTCACTGATAAGGCGAGGGAGTTTGGTGCTGGGCCATTGTTTAACAGAATTCTACCCTTGCTTATGCAGCCAACACTAGAGGACCAAGAGCGGCATCTTCTGGTGAAGGTTATTGATAGGGTATTGTACAAGCTGGATGAGTTGGTTCGACCTTACGTACACAAGATTCTTGTGGTTATCGAACCACTGTTAATTGATGAAGATTATTATGCTCGTGTTGAGGGGAGAGAGATCATCTCTAATCTGAGTAAGGCTGCTGGTTTGGCCACCATGATTGCTGCCATGAGACCAGATATTGACAATATTGATGAATATGTCAGGAATACAACTGCAAGGGCTTTCAGTGTTGTGGCTTCAGCTTTGGGTATTCCAGCACTGCTGCCATTCTTGAAGGCTGTGTGTCAGAGTAAGAAGTCATGGCAAGCTAGGCACACTGGTATTAAGATTGTTCAGCAGATTGCCATTTTGATTGGTTGTGCTGTTCTGCCACACTTGAGGTCTTTGGTCGAGATTATAGAACATGGTCTTAATGACGAGAACCAGAAGGTGCGTACAATTACAGCACTCTCTCTTGCTGCCCTTGCTGAGGCTTCGGCTCCATATGGTATTGAGAGCTTTGACTCTGTATTGAAGCCTTTGTGGAAAGGTATAAGGTCACACCGTGGTAAGGTCTTGGCTGCTTTCTTGAAGGCCATTGGATTTATTATTCCTCTGATGGATGCGCTCTACGCTAGCTACTATACGAAAGAAGTCATGTTTATTTTGATTCGGGAATTCCAGTCACCTGATGAAGAAATGAAGAAGATTGTTCTGAAAGTGGTGAAGCAGTGTGTTAGCACTGAAGGTGTTGAGGCTGATTACATAAGATCTGATATTCTTCCAGAGTTCTTCAGAAACTTCTGGGTGAGGAGGATGGCATTGGATAGGAGAAACTACAAGCAGCTTGTGGAGACCACTGTAGAGATAGCCAACAAGGTTGGTGTTGCTGATATAGTGGGTAGGATCGTGGAAGATCTTAAAGACGAAAGTGAACCCTATAGGCGTATGGTTATGGAGACAATAGAGAAGGTGGTGACCAACTTGGGTGCATCTGATATTGATGCTCGCTTGGAGGAGCTTCTGATTGATGGTATACTTTACGCTTTTCAAGAGCAGACTTCTGATGATGCTAATGTCATGCTTAATGGGTTTGGGGCGGTGGTCAATGCTCTTGGACAGAGGGTCAAACCTTACCTCCCTCAGATTTGTGGTACAATTAAGTGGCGTTTGAACAACAAAAGTGCTAAAGTCAGGCAGCAGGCTGCTGATCTCATTGCGAGAATTGCAGTGGTGATGAAACAGTGTGGAGAGGAACAGCTTATGGGTCACTTGGGTGTGGTCTTGTATGAGTATCTTGGAGAGGAGTATCCTGAGGTGCTGGGATCAATCCTAGGAGCCCTTAAAGCTATTGTGAATGTCATTGGTATGACTAAGATGACTCCACCCATAAAGGATCTGCTTCCCCGGTTGACTCCTATTTTGAAGAATAGGCATGAGAAAGTGCAGGAGAACTGTATTGATCTAGTGGGTCGTATTGCTGACCGCGGAGCTGAGTTTGTCCCTGCAAGGGAATGGATGAGGATATGCTTTGAGCTTCTTGAGATGCTCAAGGCTCACAAGAAAGGTATCAGAAGGGCTACTGTCAACACCTTTGGGTACATTGCCAAAGCCATTGGGCCGCAGGATGTCTTGGCAACTCTTCTGAACAATCTTAAGGTGCAGGAGCGTCAGAACCGTGTTTGCACAACTGTGGCTATTGCGATTGTTGCTGAGACGTGTTCACCTTTCACTGTTTTGCCAGCACTGATGAATGAGTATCGTGTTCCGGAGCTGAATGTCCAGAATGGTGTCTTGAAATCTCTCTCGTTCCTTTTTGAGTATATTGGTGAAATGGGGAAGGATTACATCTATGCGGTGACTCCTCTACTTGAAGATGCTCTCATGGATAGAGATCTGGTGCACAGGCAAACTGCAGCTTCTGCTGTAAAGCACATGGCTCTCGGAGTGGCAGGATTGGGGTGTGAAGATGCCCTGGTCCATCTGATGAACTACGTGTGGCCCAATATTTTTGAGACTTCGCCTCATGTCATCAATGCTGTTATGGAAGCCATCGAAGGGATGAGGGTGGCTTTGGGAGCTGCCGCCATACTGAACTATTGTCTGCAGGGCCTGTTCCACCCAGCAAGGAAAGTTAGGGAAGTGTACTGGAAAATTTACAATTCTCTTTACATCGGAGCACAGGATTCCCTTGTGGCTGCTTACCCTATTCTGGAGGATGAGGGAGAAAACATCTATAGTAGACCTGAATTAATGATGTTTATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_24226.p1 GENE.R_Transcript_24226~~R_Transcript_24226.p1 ORF type:complete len:1275 (+),score=380.92,SF3b1|PF08920.6|3e+02,SF3b1|PF08920.6|4.1e-43,HEAT_2|PF13646.2|1.6e+04,HEAT_2|PF13646.2|1.1,HEAT_2|PF13646.2|0.31,HEAT_2|PF13646.2|1.6e+02,HEAT_2|PF13646.2|4.3,HEAT_2|PF13646.2|0.29,HEAT_2|PF13646.2|0.036,HEAT_2|PF13646.2|1.3,HEAT|PF02985.18|4.1e+03,HEAT|PF02985.18|5.1e+03,HEAT|PF02985.18|3.3e+03,HEAT|PF02985.18|4.2e+02,HEAT|PF02985.18|0.015,HEAT|PF02985.18|7.9e+03,HEAT|PF02985.18|7.1,HEAT|PF02985.18|7.9e+03,HEAT|PF02985.18|44,HEAT|PF02985.18|1.9e+02,HEAT|PF02985.18|3.9,HEAT|PF02985.18|1e+03,HEAT_EZ|PF13513.2|1.5e+03,HEAT_EZ|PF13513.2|4.8e+03,HEAT_EZ|PF13513.2|47,HEAT_EZ|PF13513.2|23,HEAT_EZ|PF13513.2|1,HEAT_EZ|PF13513.2|8.4e+03,HEAT_EZ|PF13513.2|15 R_Transcript_24226:238-4062(+)
MASVDPEIAKTQEERKKMEQELASLTSVAYDVDLYGSNGRDDYVQSIPVDDDEENADAMDNEVARKLASYTAPKSLLKEMPGLGGDADDGFRKPQRIIDREDDYRRRRLSRVISPERHDAFAMGDKTPDVNVRTYADVMREEALKREKEETLRAIAKKKKEEEEQKKSMEEEKGADGAQAQQSQKRRNRWDQSQDQQADGGAAKKAKSASDWDMPDSTPGIGRWDATPTPGRLGDATPSVRRNRWDETPTPGRVNDSDATPAAGGATPGATPAGMTWDATPKLSGMATPTPKRQRSRWDETPATMGSATPMAGATPSAAMTPGVTPVGGVELATPTPGQINLRGPLTPEQYNLMRWEKDIEERNRPLTDEELDAMFPSEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYQIPVEDRGQQFDVGKEPANGLPFMKPEDYQYFGVLLNEENEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSDILPEFFRNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLIARIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLMNYVWPNIFETSPHVINAVMEAIEGMRVALGAAAILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDSLVAAYPILEDEGENIYSRPELMMFI*

Click here to download the sequence:
Link to NCBI Protein BLAST